Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 2.0e-79 298.9 138 100.0
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 5.0e-30 134.8 124 59.7
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 7.0e-24 114.4 145 44.1
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.2e-23 113.6 129 46.5
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 2.5e-21 105.9 127 43.3
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 1.2e-20 103.6 122 50.8
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 1.2e-20 103.6 127 44.1
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 8.0e-20 100.9 125 42.4
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 5.2e-19 98.2 124 44.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.6e-18 95.9 124 46.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 9.8e-18 94.0 133 39.1
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 9.2e-16 87.4 130 36.2
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 3.5e-15 85.5 129 41.9
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 1.0e-14 84.0 126 38.9
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.3e-14 83.6 119 42.0
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 3.0e-14 82.4 130 39.2
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 3.0e-14 82.4 95 44.2
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 3.9e-14 82.0 123 43.1
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 3.9e-14 82.0 128 37.5
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 3.9e-14 82.0 107 45.8
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 8.6e-14 80.9 124 41.1
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.9e-13 79.7 124 39.5
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 4.3e-13 78.6 117 40.2
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 5.6e-13 78.2 116 36.2
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 7.3e-13 77.8 141 39.7
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 9.5e-13 77.4 113 35.4
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 9.5e-13 77.4 133 39.8
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.2e-12 77.0 123 38.2
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 4.7e-12 75.1 99 41.4
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 6.2e-12 74.7 105 41.9
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 1.1e-11 73.9 117 38.5
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.4e-11 73.6 123 38.2
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 3.1e-11 72.4 120 41.7
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 4.0e-11 72.0 128 36.7
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.2e-10 70.5 123 35.8
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.5e-10 70.1 125 32.8
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 1.5e-10 70.1 122 36.9
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 2.0e-10 69.7 120 41.7
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 2.0e-10 69.7 110 41.8
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 3.4e-10 68.9 116 38.8
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.4e-10 68.9 123 35.0
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 4.4e-10 68.6 130 39.2
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 5.8e-10 68.2 85 44.7
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 7.5e-10 67.8 126 32.5
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 7.5e-10 67.8 113 42.5
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 9.8e-10 67.4 121 38.0
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 9.8e-10 67.4 115 36.5
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 9.8e-10 67.4 115 37.4
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 1.7e-09 66.6 126 35.7
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 2.9e-09 65.9 119 33.6
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 3.7e-09 65.5 127 33.9
Eucgr.G02340 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.1e-08 63.9 118 35.6
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 4.1e-08 62.0 103 35.9
Lsat_1_v5_gn_8_38860 Lactuca sativa HOM05D007842 ORTHO05D009661 4.1e-08 62.0 81 42.0
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 7.1e-08 61.2 119 33.6
Lsat_1_v5_gn_8_38840 Lactuca sativa HOM05D007842 ORTHO05D009661 9.2e-08 60.8 101 36.6
ECA233G2952 Erigeron canadensis HOM05D007842 ORTHO05D009661 2.7e-07 59.3 112 37.5
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 3.5e-07 58.9 110 34.5
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 3.5e-07 58.9 101 36.6
ECA234G0518 Erigeron canadensis HOM05D007842 ORTHO05D009661 6.0e-07 58.2 111 31.5
FvH4_4g27740 Fragaria vesca HOM05D022909 ORTHO05D009661 6.0e-07 58.2 124 33.1
FAN12G3934 Fragaria x ananassa HOM05D022909 ORTHO05D009661 6.0e-07 58.2 124 33.1
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 6.0e-07 58.2 121 34.7
FAN07G2083 Fragaria x ananassa HOM05D022909 ORTHO05D009661 7.8e-07 57.8 139 31.7
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 7.8e-07 57.8 64 40.6
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 7.8e-07 57.8 113 36.3
ECA234G4760 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.0e-06 55.8 110 34.5
DCAR_026722 Daucus carota HOM05D007842 ORTHO05D009661 3.9e-06 55.5 104 35.6
arahy.Tifrunner.gnm1.ann1.S09ETB Arachis hypogaea HOM05D007842 ORTHO05D009661 8.6e-06 54.3 49 53.1
CsaV3_5G034090 Cucumis sativus L. HOM05D030371 ORTHO05D009661 8.6e-06 54.3 112 37.5


User provided reference genes

Program Settings