Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 1.7e-37 159.1 94 100.0
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.4e-15 86.3 94 54.3
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 3.1e-15 85.1 94 53.2
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 3.1e-15 85.1 94 54.3
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 5.3e-15 84.3 94 56.4
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 7.7e-14 80.5 97 54.6
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.7e-13 79.3 97 52.6
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 5.0e-13 77.8 94 51.1
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 8.5e-13 77.0 97 52.6
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 8.5e-13 77.0 97 52.6
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 1.4e-12 76.3 96 47.9
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 2.5e-12 75.5 94 50.0
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 5.5e-12 74.3 97 47.4
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 1.6e-11 72.8 48 75.0
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.7e-11 72.0 102 47.1
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 2.7e-11 72.0 94 46.8
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 3.6e-11 71.6 94 48.9
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 6.1e-11 70.9 39 84.6
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-10 70.1 102 47.1
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.4e-10 69.7 102 46.1
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.8e-10 69.3 37 89.2
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.8e-10 69.3 37 89.2
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 3.9e-10 68.2 95 49.5
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 5.1e-10 67.8 48 70.8
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 6.7e-10 67.4 94 50.0
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 6.7e-10 67.4 94 45.7
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 8.8e-10 67.0 44 75.0
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 2.0e-09 65.9 37 81.1
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 2.5e-09 65.5 39 74.4
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 4.3e-09 64.7 89 46.1
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 4.8e-08 61.2 38 81.6
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 8.2e-08 60.5 37 75.7
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 1.4e-07 59.7 94 44.7
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 4.1e-07 58.2 85 44.7
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 5.3e-07 57.8 94 45.7
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 6.9e-07 57.4 97 43.3
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 1.2e-06 56.6 47 57.4
Sabra10G0095500 Salix brachista HOM05D008456 ORTHO05D010229 1.2e-06 56.6 88 40.9
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 1.5e-06 56.2 97 42.3
unitig_22.g5569 Utricularia gibba HOM05D008456 ORTHO05D010229 1.5e-06 56.2 48 56.2
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 2.6e-06 55.5 41 65.9
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 3.4e-06 55.1 95 41.1
Sabra08G0091200 Salix brachista HOM05D008456 ORTHO05D010229 4.5e-06 54.7 94 41.5


User provided reference genes

Program Settings