Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G063451 Manihot esculenta HOM05D008065 ORTHO05D010197 6.1e-191 670.6 331 100.0
Manes.14G109200 Manihot esculenta HOM05D008065 ORTHO05D010197 1.8e-57 227.3 316 45.9
Sabra19G0132700 Salix brachista HOM05D008065 ORTHO05D010197 2.8e-55 219.9 261 50.6
Sabra11G0031000 Salix brachista HOM05D008065 ORTHO05D010197 1.7e-52 210.7 470 35.5
Sabra15G0047700 Salix brachista HOM05D008065 ORTHO05D010197 7.5e-48 195.3 432 36.6
Sabra15G0060600 Salix brachista HOM05D008065 ORTHO05D010197 1.8e-46 190.7 390 38.2
Sabra15G0045500 Salix brachista HOM05D008065 ORTHO05D010197 4.1e-46 189.5 390 38.2
Sabra15G0045000 Salix brachista HOM05D008065 ORTHO05D010197 7.0e-46 188.7 390 37.9
RcHm_v2.0_Chr2g0160731 Rosa chinensis HOM05D008065 ORTHO05D010197 4.6e-45 186.0 260 40.4
Prupe.3G223900 Prunus persica HOM05D008065 ORTHO05D010197 7.8e-45 185.3 260 42.7
Sabra15G0053500 Salix brachista HOM05D008065 ORTHO05D010197 2.3e-44 183.7 221 50.7
RcHm_v2.0_Chr2g0160741 Rosa chinensis HOM05D008065 ORTHO05D010197 3.6e-42 176.4 261 39.5
Sabra19G0121400 Salix brachista HOM05D008065 ORTHO05D010197 1.4e-41 174.5 323 36.5
Sabra15G0048600 Salix brachista HOM05D008065 ORTHO05D010197 1.8e-41 174.1 393 36.9
Dinv18567 Davidia involucrata HOM05D008065 ORTHO05D010197 1.3e-39 167.9 259 42.5
RcHm_v2.0_Chr2g0160721 Rosa chinensis HOM05D008065 ORTHO05D010197 1.3e-39 167.9 273 38.1
FvH4_6g44000 Fragaria vesca HOM05D008065 ORTHO05D010197 4.9e-39 166.0 261 38.3
FvH4_6g43950 Fragaria vesca HOM05D008065 ORTHO05D010197 9.2e-38 161.8 262 37.0
FvH4_6g43960 Fragaria vesca HOM05D008065 ORTHO05D010197 2.7e-37 160.2 261 37.5
Sabra15G0059600 Salix brachista HOM05D008065 ORTHO05D010197 4.6e-37 159.5 465 32.0
MD09G1101800 Malus domestica HOM05D008065 ORTHO05D010197 6.0e-37 159.1 259 37.1
Sabra15G0046200 Salix brachista HOM05D008065 ORTHO05D010197 1.3e-36 157.9 423 33.8
Sabra15G0043300 Salix brachista HOM05D008065 ORTHO05D010197 1.7e-36 157.5 465 31.8
FAN05G2598 Fragaria x ananassa HOM05D008065 ORTHO05D010197 3.9e-36 156.4 217 40.6
MD17G1089300 Malus domestica HOM05D008065 ORTHO05D010197 5.0e-36 156.0 261 37.5
Sabra15G0060400 Salix brachista HOM05D008065 ORTHO05D010197 6.6e-36 155.6 420 33.3
Potri.013G151700 Populus trichocarpa HOM05D008065 ORTHO05D010197 1.9e-35 154.1 147 50.3
MD17G1089600 Malus domestica HOM05D008065 ORTHO05D010197 2.5e-35 153.7 242 39.3
MD17G1089500 Malus domestica HOM05D008065 ORTHO05D010197 5.6e-35 152.5 277 35.0
MD17G1089400 Malus domestica HOM05D008065 ORTHO05D010197 9.5e-35 151.8 261 37.2
RcHm_v2.0_Chr2g0160711 Rosa chinensis HOM05D008065 ORTHO05D010197 4.7e-34 149.4 261 37.5
Dinv18565 Davidia involucrata HOM05D008065 ORTHO05D010197 2.3e-33 147.1 410 32.2
FvH4_6g43940 Fragaria vesca HOM05D008065 ORTHO05D010197 8.9e-33 145.2 261 37.2
FAN02G2083 Fragaria x ananassa HOM05D008065 ORTHO05D010197 2.0e-32 144.1 248 38.7
Sabra15G0044700 Salix brachista HOM05D008065 ORTHO05D010197 6.4e-31 139.0 290 36.6
FvH4_1g28610 Fragaria vesca HOM05D008065 ORTHO05D010197 3.2e-30 136.7 263 36.5
Prupe.3G224100 Prunus persica HOM05D008065 ORTHO05D010197 3.2e-30 136.7 147 46.9
Dinv13863 Davidia involucrata HOM05D008065 ORTHO05D010197 2.7e-29 133.7 209 39.2
FvH4_6g43990 Fragaria vesca HOM05D008065 ORTHO05D010197 7.3e-27 125.6 254 36.6
FAN03G2096 Fragaria x ananassa HOM05D008065 ORTHO05D010197 3.6e-26 123.2 209 37.8
FAN06G4565 Fragaria x ananassa HOM05D008065 ORTHO05D010197 6.2e-26 122.5 221 37.6
Rhsim04G0058500 Rhododendron simsii HOM05D008065 ORTHO05D010197 5.2e-25 119.4 349 31.2
Sabra15G0054100 Salix brachista HOM05D008065 ORTHO05D010197 1.3e-23 114.8 377 31.0
Dinv18566 Davidia involucrata HOM05D008065 ORTHO05D010197 3.8e-23 113.2 205 37.1
Sabra15G0046500 Salix brachista HOM05D008065 ORTHO05D010197 1.1e-22 111.7 107 51.4
Rhsim04G0060100 Rhododendron simsii HOM05D008065 ORTHO05D010197 1.9e-22 110.9 262 30.9
MD17G1089200 Malus domestica HOM05D008065 ORTHO05D010197 3.2e-22 110.2 181 34.3
Sabra15G0052300 Salix brachista HOM05D008065 ORTHO05D010197 5.6e-19 99.4 250 33.2
Cc05_g05590 Coffea canephora HOM05D008065 ORTHO05D010197 6.2e-18 95.9 270 30.7
FvH4_6g43970 Fragaria vesca HOM05D008065 ORTHO05D010197 8.9e-17 92.0 199 34.7
Dinv10888 Davidia involucrata HOM05D008065 ORTHO05D010197 2.6e-16 90.5 177 33.9
Cc05_g05580 Coffea canephora HOM05D008065 ORTHO05D010197 5.8e-16 89.4 276 29.0
RcHm_v2.0_Chr7g0197991 Rosa chinensis HOM05D008065 ORTHO05D010197 4.9e-15 86.3 151 35.1
GSVIVG01003198001 Vitis vinifera HOM05D001396 ORTHO05D000493 1.3e-12 78.2 198 29.8
Dinv40490 Davidia involucrata HOM05D001396 ORTHO05D000493 1.7e-12 77.8 194 32.5
Aqoxy3G03380 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 2.5e-11 73.9 219 29.2
MBI02_g37280_MAGBIO Magnolia biondii HOM05D000051 ORTHO05D010197 2.5e-11 73.9 133 33.1
CSS0005570 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 3.3e-11 73.6 193 28.0
FAN06G3397 Fragaria x ananassa HOM05D008065 ORTHO05D010197 3.3e-11 73.6 204 30.9
Dinv23650 Davidia involucrata HOM05D008065 ORTHO05D010197 5.6e-11 72.8 161 31.1
FvH4_7g14510 Fragaria vesca HOM05D008065 ORTHO05D010197 1.3e-10 71.6 204 30.4
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.3e-10 71.6 195 29.2
QL03p053101 Quercus lobata HOM05D001396 ORTHO05D000493 2.1e-10 70.9 253 25.7
QL05p081980 Quercus lobata HOM05D001396 ORTHO05D000493 2.1e-10 70.9 253 25.7
Prupe.3G224000 Prunus persica HOM05D008065 ORTHO05D010197 3.6e-10 70.1 94 40.4
Sabra15G0047900 Salix brachista HOM05D008065 ORTHO05D010197 3.6e-10 70.1 95 51.6
vmacro23257 Vaccinium macrocarpon HOM05D008065 ORTHO05D010197 4.8e-10 69.7 140 34.3
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.1e-09 68.6 186 28.0
CSS0005231 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.8e-09 67.8 138 33.3
Manes.15G019150 Manihot esculenta HOM05D008065 ORTHO05D010197 1.8e-09 67.8 68 55.9
Solyc04g057950.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 2.4e-09 67.4 251 27.1
Peaxi162Scf00650g00334 Petunia axillaris HOM05D001396 ORTHO05D000493 4.0e-09 66.6 246 24.8
Sopen04g025810 Solanum pennellii HOM05D001396 ORTHO05D000493 4.0e-09 66.6 251 26.7
PGSC0003DMG400018498 Solanum tuberosum HOM05D001396 ORTHO05D000493 6.9e-09 65.9 229 25.3
TAR624G0459 Trochodendron aralioides HOM05D001396 ORTHO05D000493 6.9e-09 65.9 189 25.4
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 6.9e-09 65.9 197 27.4
Dinv23711 Davidia involucrata HOM05D001396 ORTHO05D000493 9.0e-09 65.5 268 26.5
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 1.2e-08 65.1 197 26.4
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 1.5e-08 64.7 186 31.2
Peaxi162Scf00338g00627 Petunia axillaris HOM05D001396 ORTHO05D000493 1.5e-08 64.7 235 27.7
Prupe.3G224200 Prunus persica HOM05D008065 ORTHO05D010197 1.5e-08 64.7 94 40.4
Dinv39819 Davidia involucrata HOM05D001396 ORTHO05D000493 4.5e-08 63.2 200 27.0
FAN10G1752 Fragaria x ananassa HOM05D008065 ORTHO05D010197 4.5e-08 63.2 108 37.0
PGSC0003DMG400018500 Solanum tuberosum HOM05D001396 ORTHO05D000493 5.8e-08 62.8 303 23.8
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.7e-07 61.2 184 29.3
Peaxi162Scf00168g01126 Petunia axillaris HOM05D005268 ORTHO05D000493 1.7e-07 61.2 243 25.9
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.2e-07 60.8 181 26.0
Peaxi162Scf00253g00220 Petunia axillaris HOM05D001396 ORTHO05D000493 2.9e-07 60.5 238 26.1
Peaxi162Scf00253g00227 Petunia axillaris HOM05D001396 ORTHO05D000493 2.9e-07 60.5 238 26.1
Peaxi162Scf00168g01738 Petunia axillaris HOM05D005268 ORTHO05D000493 4.9e-07 59.7 148 31.1
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 6.4e-07 59.3 228 27.2
Gohir.A05G165400 Gossypium hirsutum HOM05D001396 ORTHO05D000493 8.4e-07 58.9 225 24.4
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 1.4e-06 58.2 184 27.7
Duzib235G1341 Durio zibethinus HOM05D001396 ORTHO05D000493 1.4e-06 58.2 185 24.9
Dinv18999 Davidia involucrata HOM05D001396 ORTHO05D000493 1.9e-06 57.8 199 28.1
THA.LOC104809676 Tarenaya hassleriana HOM05D001396 ORTHO05D000493 1.9e-06 57.8 212 26.9
Dinv18995 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-06 57.0 198 25.8
Dinv18996 Davidia involucrata HOM05D001396 ORTHO05D000493 3.2e-06 57.0 194 26.3
Peaxi162Scf00066g00161 Petunia axillaris HOM05D005268 ORTHO05D000493 3.2e-06 57.0 197 28.9
Solyc08g005333.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.2e-06 56.6 197 25.4
Dinv39824 Davidia involucrata HOM05D001396 ORTHO05D000493 5.4e-06 56.2 199 28.1
Eucgr.A01780 Eucalyptus grandis HOM05D001396 ORTHO05D000493 5.4e-06 56.2 224 27.2
FAN09G2504 Fragaria x ananassa HOM05D008065 ORTHO05D010197 5.4e-06 56.2 46 58.7
PGSC0003DMG401006305 Solanum tuberosum HOM05D001396 ORTHO05D000493 5.4e-06 56.2 223 22.9
Peaxi162Scf00168g01739 Petunia axillaris HOM05D005268 ORTHO05D000493 7.1e-06 55.8 171 29.8
Gorai.009G173600 Gossypium raimondii HOM05D001396 ORTHO05D000493 9.3e-06 55.5 207 24.6


User provided reference genes

Program Settings