Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 5.6e-65 250.8 123 100.0
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.4e-44 182.2 124 73.4
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.4e-30 135.2 122 59.8
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.9e-29 131.3 122 55.7
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 7.9e-27 124.0 99 62.6
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 7.9e-27 124.0 99 62.6
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.3e-24 116.7 120 53.3
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 3.1e-23 112.1 125 48.0
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.5e-22 109.8 123 47.2
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 5.9e-22 107.8 124 49.2
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.7e-21 106.3 120 46.7
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 2.2e-21 105.9 120 45.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 3.8e-21 105.1 124 46.8
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 5.0e-21 104.8 117 43.6
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 6.5e-21 104.4 119 46.2
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 8.5e-21 104.0 123 47.2
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.1e-20 103.6 123 48.0
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.4e-20 103.2 124 48.4
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 7.2e-20 100.9 101 44.6
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 7.2e-20 100.9 99 50.5
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-19 100.1 122 45.1
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-19 100.1 122 45.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.6e-19 99.8 99 49.5
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 2.1e-19 99.4 106 47.2
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.6e-19 98.2 125 45.6
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 7.9e-19 97.4 120 44.2
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.0e-18 97.1 125 44.8
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 2.3e-18 95.9 120 45.0
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 2.3e-18 95.9 126 39.7
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.9e-18 95.1 122 42.6
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 3.9e-18 95.1 100 45.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 5.1e-18 94.7 99 45.5
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 8.8e-18 94.0 95 52.6
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.5e-17 93.2 120 45.0
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 2.5e-17 92.4 125 38.4
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 5.7e-17 91.3 120 41.7
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 5.7e-17 91.3 96 46.9
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 5.7e-17 91.3 130 46.9
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.4e-17 90.9 98 50.0
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.7e-16 89.7 97 50.5
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.2e-16 89.4 115 46.1
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 2.2e-16 89.4 102 45.1
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 3.7e-16 88.6 126 42.1
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 3.7e-16 88.6 104 41.3
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.8e-16 88.2 99 46.5
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 6.3e-16 87.8 110 46.4
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 8.2e-16 87.4 96 46.9
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.8e-15 86.3 87 50.6
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.8e-15 86.3 105 42.9
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 3.1e-15 85.5 101 41.6
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 3.1e-15 85.5 97 45.4
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.1e-15 85.1 93 49.5
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 5.3e-15 84.7 119 42.9
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 6.9e-15 84.3 121 39.7
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.1e-15 84.0 98 43.9
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.2e-14 83.6 105 43.8
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-14 83.6 124 40.3
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-14 83.6 124 40.3
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.2e-14 83.6 130 37.7
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.2e-14 83.6 126 41.3
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 2.0e-14 82.8 125 41.6
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 2.0e-14 82.8 122 42.6
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.5e-14 81.6 105 40.0
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.0e-13 80.5 123 40.7
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.3e-13 80.1 86 45.3
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.3e-13 80.1 104 40.4
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.3e-13 80.1 112 37.5
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 2.9e-13 79.0 118 42.4
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 2.9e-13 79.0 88 46.6
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.8e-13 78.6 104 36.5
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 5.0e-13 78.2 113 38.9
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-12 77.0 119 39.5
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.1e-12 77.0 121 37.2
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 1.1e-12 77.0 92 45.7
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.4e-12 76.6 103 36.9
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.4e-12 76.6 128 40.6
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.4e-12 76.6 128 40.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.4e-12 76.6 95 43.2
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 4.2e-12 75.1 102 41.2
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 4.2e-12 75.1 120 35.0
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.1e-11 72.8 94 43.6
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-11 72.8 123 42.3
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 6.1e-11 71.2 100 45.0
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.3e-10 69.3 102 39.2
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 3.0e-10 68.9 105 37.1
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 3.0e-10 68.9 105 37.1
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 3.9e-10 68.6 101 36.6
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 8.8e-10 67.4 100 36.0
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.6e-09 65.9 118 34.7
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.4e-09 65.1 84 35.7
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 5.7e-09 64.7 104 36.5
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 7.4e-09 64.3 107 38.3
ClCG05G022270 Citrullus lanatus HOM05D039188 ORTHO05D034722 4.8e-08 61.6 105 40.0
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.3e-07 58.2 64 43.8
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 1.2e-06 57.0 89 39.3
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.5e-06 55.1 84 39.3
ECA233G3216 Erigeron canadensis HOM05D026189 ORTHO05D009508 4.5e-06 55.1 89 41.6
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 5.9e-06 54.7 95 35.8
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.9e-06 54.7 51 47.1


User provided reference genes

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