Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 9.4e-106 387.1 230 100.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.1e-77 292.4 237 73.4
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.1e-74 283.9 238 71.4
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.3e-72 276.2 235 68.9
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.5e-71 273.5 235 68.9
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 4.4e-71 271.9 255 66.7
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 6.3e-70 268.1 239 70.7
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.1e-69 267.3 241 69.3
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 7.0e-69 264.6 237 68.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 7.0e-69 264.6 232 67.7
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 9.1e-69 264.2 236 66.1
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.6e-68 263.5 238 67.6
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.0e-68 263.1 232 64.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.0e-68 263.1 234 64.5
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.7e-68 262.7 242 65.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 5.9e-68 261.5 242 68.6
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 7.7e-68 261.2 233 69.1
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.7e-68 261.2 240 65.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 7.7e-68 261.2 238 71.0
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.0e-67 260.8 232 65.1
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.7e-67 260.0 237 69.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.7e-67 260.0 239 65.3
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.7e-67 260.0 234 65.4
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 2.3e-67 259.6 233 65.2
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 3.8e-67 258.8 242 64.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.5e-66 256.9 238 67.6
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.5e-66 256.9 231 68.0
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 2.5e-66 256.1 203 70.9
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 4.2e-66 255.4 224 69.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 5.5e-66 255.0 230 66.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.8e-65 252.7 241 66.0
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 8.0e-65 251.1 236 64.0
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.0e-64 250.8 234 66.2
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.8e-64 250.0 230 64.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 2.3e-64 249.6 230 63.9
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.3e-64 249.6 238 63.4
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.3e-64 249.6 238 67.6
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 5.7e-63 245.0 233 63.5
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.7e-63 245.0 232 63.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.7e-62 243.4 230 62.2
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.8e-62 242.7 240 66.7
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.7e-62 242.3 242 65.3
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 8.3e-62 241.1 230 62.6
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.1e-61 240.7 234 60.3
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 7.0e-61 238.0 237 63.7
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 9.2e-61 237.7 230 62.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.7e-60 236.1 231 62.3
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.5e-60 235.7 231 61.9
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.5e-60 235.7 231 61.9
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.0e-59 234.2 204 64.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.9e-59 232.3 230 60.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 6.6e-59 231.5 230 60.4
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 8.6e-59 231.1 231 62.3
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 5.6e-58 228.4 229 60.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 7.3e-58 228.0 230 61.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 7.3e-58 228.0 239 60.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 9.5e-58 227.6 230 61.7
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.6e-57 225.7 231 61.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.1e-57 224.9 203 62.1
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 8.0e-57 224.6 203 62.1
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.2e-56 221.9 230 58.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.8e-56 221.5 211 64.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-55 220.7 235 57.9
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 2.6e-55 219.5 232 58.2
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.6e-55 219.5 161 75.8
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.4e-55 218.8 211 64.0
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 5.8e-55 218.4 174 71.3
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 9.8e-55 217.6 230 56.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.3e-54 217.2 233 57.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.7e-54 216.9 211 63.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-54 216.5 211 63.5
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 2.2e-54 216.5 230 59.6
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.9e-54 216.1 173 69.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 3.7e-54 215.7 233 57.9
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 8.3e-54 214.5 173 69.4
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 8.3e-54 214.5 204 63.2
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 8.3e-54 214.5 170 79.4
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.1e-53 214.2 174 68.4
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.1e-53 214.2 171 70.2
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.9e-53 213.4 209 60.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.9e-53 213.4 174 67.8
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 2.4e-53 213.0 174 67.8
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 3.2e-53 212.6 209 59.8
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 7.0e-53 211.5 174 69.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 9.2e-53 211.1 206 60.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.2e-52 210.7 235 57.9
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.6e-52 210.3 173 70.5
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.6e-52 210.3 173 70.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.6e-52 210.3 237 60.3
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.0e-52 209.9 134 82.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.0e-52 209.9 202 62.4
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.8e-52 208.0 173 68.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.0e-51 207.6 253 53.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.3e-51 207.2 241 58.5
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.3e-50 202.2 208 59.1
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.8e-49 199.5 175 66.9
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.1e-48 197.6 161 67.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.8e-48 196.8 223 55.2
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.3e-48 196.4 155 69.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.1e-48 196.1 174 66.1
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.0e-48 195.7 161 67.7
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 6.8e-48 194.9 194 57.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.2e-47 194.1 248 52.4
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 9.8e-47 191.0 204 60.8
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.7e-46 190.3 250 50.0
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 8.3e-46 188.0 164 61.6
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 5.4e-45 185.3 169 62.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 5.6e-42 175.3 173 60.7
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.6e-41 173.7 178 59.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.4e-37 160.6 197 56.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.5e-34 150.6 140 63.6
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.3e-34 149.4 198 50.0
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 4.7e-33 145.6 128 62.5
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.4e-32 144.1 128 61.7
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 6.8e-32 141.7 173 53.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.0e-31 140.2 145 53.1
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.4e-29 133.3 144 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.5e-26 123.2 144 49.3
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.1e-24 117.9 145 48.3
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 6.4e-22 108.6 104 54.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 6.6e-19 98.6 75 68.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 8.1e-17 91.7 106 49.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.1e-16 89.7 105 49.5
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.6e-12 75.9 102 52.9
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 9.6e-10 68.2 66 63.6
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 8.4e-06 55.1 156 31.4


User provided reference genes

Program Settings