Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.6e-58 228.4 106 100.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 2.2e-46 188.7 106 79.2
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.9e-45 185.7 106 79.2
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.2e-42 176.4 106 74.5
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.4e-42 174.5 106 70.8
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.3e-41 172.9 106 70.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 3.7e-41 171.4 106 71.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 6.3e-41 170.6 106 68.9
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 8.3e-41 170.2 106 67.9
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.8e-40 169.1 106 70.8
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.8e-40 169.1 106 71.7
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.1e-40 167.9 106 68.9
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.1e-40 167.9 106 68.9
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 9.2e-40 166.8 106 67.9
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.2e-40 166.8 106 67.9
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.2e-39 166.4 105 66.7
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.6e-39 166.0 106 67.9
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.6e-39 166.0 106 68.9
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 2.7e-39 165.2 106 68.9
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.7e-39 165.2 106 68.9
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.7e-39 165.2 105 67.6
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 4.5e-39 164.5 102 69.6
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 4.5e-39 164.5 102 69.6
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.5e-39 164.5 104 70.2
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.8e-39 163.7 106 67.9
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.0e-38 163.3 106 67.9
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.7e-38 162.5 104 68.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.5e-37 159.5 103 65.0
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.5e-37 159.5 102 65.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.5e-37 159.5 105 65.7
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 3.3e-37 158.3 101 66.3
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 3.3e-37 158.3 101 66.3
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.3e-37 157.1 106 65.1
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 9.5e-37 156.8 103 67.0
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.2e-36 156.4 101 65.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 2.8e-36 155.2 106 64.2
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.6e-36 154.8 104 63.5
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 4.7e-36 154.5 103 65.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 4.7e-36 154.5 103 65.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 6.1e-36 154.1 103 65.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 8.0e-36 153.7 103 62.1
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.0e-35 153.3 101 65.3
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.4e-35 152.9 103 64.1
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.3e-35 152.1 97 69.1
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.3e-35 152.1 101 64.4
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.0e-35 151.8 100 64.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 3.0e-35 151.8 101 64.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 4.0e-35 151.4 96 65.6
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 6.8e-35 150.6 104 61.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.5e-34 149.4 100 65.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.5e-34 149.4 101 63.4
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.6e-34 148.7 103 62.1
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.6e-34 148.7 92 67.4
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 4.4e-34 147.9 101 62.4
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 5.7e-34 147.5 103 62.1
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 7.5e-34 147.1 105 59.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-33 146.4 91 72.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.9e-33 145.2 104 59.6
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.9e-33 145.2 103 60.2
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.4e-32 142.9 104 60.6
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.4e-32 142.1 102 58.8
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.2e-32 141.7 104 60.6
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.1e-32 141.4 102 59.8
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.7e-31 138.7 106 58.5
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 7.8e-31 137.1 90 63.3
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 5.0e-30 134.4 101 59.4
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 5.0e-30 134.4 101 59.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.6e-30 133.7 82 67.1
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-29 133.3 101 56.4
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-29 133.3 106 55.7
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-29 133.3 101 56.4
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.1e-29 133.3 106 55.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.1e-29 133.3 92 63.0
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.9e-29 132.5 123 52.8
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 2.5e-29 132.1 91 62.6
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.2e-28 129.8 103 54.4
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.6e-28 129.4 63 77.8
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 2.1e-28 129.0 101 54.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 8.0e-28 127.1 91 61.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.0e-27 126.7 100 52.0
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 2.3e-27 125.6 93 58.1
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 4.0e-27 124.8 103 56.3
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-26 123.2 106 55.7
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 9.8e-26 120.2 102 52.0
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 9.8e-26 120.2 102 54.9
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.3e-25 119.8 103 53.4
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.7e-25 119.4 103 52.4
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 2.9e-25 118.6 99 49.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 8.3e-25 117.1 82 58.5
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 8.3e-25 117.1 98 52.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 8.3e-25 117.1 103 50.5
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.4e-24 115.5 100 47.0
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 3.2e-24 115.2 103 53.4
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.2e-23 113.2 117 46.2
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.5e-23 111.7 97 52.6
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.3e-22 109.8 101 53.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 3.0e-22 108.6 100 53.0
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.5e-21 106.3 101 49.5
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.5e-21 105.5 88 53.4
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.5e-21 105.5 62 62.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 3.3e-21 105.1 49 81.6
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 5.6e-21 104.4 107 44.9
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.6e-20 101.7 94 41.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.7e-20 101.3 91 52.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 5.2e-19 97.8 92 50.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.0e-18 95.9 111 41.4
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.8e-18 94.4 108 46.3
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 8.3e-17 90.5 53 67.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 4.9e-09 64.7 96 33.3
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 7.8e-07 57.4 51 54.9


User provided reference genes

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