Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 3.9e-114 415.2 279 100.0
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 4.6e-83 312.0 281 79.0
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 2.2e-56 223.4 220 66.8
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 4.1e-55 219.2 279 55.6
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 5.2e-50 202.2 198 65.2
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 5.7e-49 198.7 205 70.2
Manes.17G022697 Manihot esculenta HOM05D012182 ORTHO05D011238 5.7e-41 172.2 89 93.3
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 1.8e-34 150.6 281 52.3
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 1.2e-33 147.9 285 54.0
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 4.3e-28 129.4 73 87.7
Manes.09G075056 Manihot esculenta HOM05D012182 ORTHO05D011238 3.0e-21 106.7 305 47.2
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 2.1e-19 100.5 70 67.1
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.1e-15 86.3 57 68.4
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.1e-15 86.3 57 68.4
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.1e-15 86.3 57 68.4
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.4e-15 85.9 57 66.7
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.2e-15 85.1 57 68.4
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.2e-15 85.1 57 66.7
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-14 84.7 57 66.7
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 1.6e-14 84.3 74 58.1
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-14 82.4 57 66.7
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 1.1e-12 78.2 62 61.3
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 2.8e-11 73.6 56 62.5
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 4.7e-11 72.8 69 49.3
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 6.2e-11 72.4 58 56.9
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.2e-11 72.4 58 58.6
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-11 72.0 58 56.9
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-11 72.0 58 56.9
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.4e-10 71.2 58 56.9
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.4e-10 71.2 58 56.9
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 1.8e-10 70.9 59 57.6
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.8e-10 70.9 58 56.9
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-10 70.5 58 55.2
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-10 70.5 58 55.2
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.1e-10 70.1 59 54.2
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.1e-10 70.1 58 55.2
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.0e-10 69.7 58 55.2
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 5.2e-10 69.3 59 52.5
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.8e-10 68.9 70 50.0
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 8.9e-10 68.6 71 46.5
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 1.2e-09 68.2 56 58.9
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.0e-09 67.4 71 50.7
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-09 67.4 58 55.2
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.6e-09 67.0 59 50.8
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 3.4e-09 66.6 71 52.1
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.4e-09 66.6 71 52.1
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.4e-09 66.6 71 52.1
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.4e-09 66.6 58 53.4
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 5.8e-09 65.9 56 58.9
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.6e-09 65.5 55 52.7
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-08 64.7 66 48.5
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.7e-08 64.3 71 50.7
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 1.7e-08 64.3 51 56.9
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.8e-08 63.2 71 49.3
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 4.9e-08 62.8 67 52.2
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 6.4e-08 62.4 50 56.0
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 6.4e-08 62.4 56 55.4
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 8.4e-08 62.0 54 57.4
Hund17666 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.4e-08 62.0 57 45.6
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 1.1e-07 61.6 50 54.0
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.4e-07 61.2 48 58.3
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.4e-07 61.2 71 49.3
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 1.4e-07 61.2 50 56.0
Hund23857 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-07 60.8 47 57.4
Ah.13g070190 Amaranthus hybridus HOM05D013973 ORTHO05D011238 2.4e-07 60.5 65 46.2
Hund00663 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-07 60.5 55 45.5
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 2.4e-07 60.5 58 43.1
Hund22407 Selenicereus undatus HOM05D035887 ORTHO05D000014 3.2e-07 60.1 57 45.6
TPR.G40251 Trifolium pratense HOM05D008981 ORTHO05D011238 3.2e-07 60.1 56 57.1
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.1e-07 58.9 54 50.0
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-06 58.2 63 44.4
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-06 58.2 63 44.4
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-06 58.2 63 44.4
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-06 58.2 63 44.4
Hund13353 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-06 57.8 50 52.0
Psat1g141520 Pisum sativum HOM05D008981 ORTHO05D011238 2.1e-06 57.4 58 51.7
Gorai.002G112900 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.7e-06 57.0 50 52.0
Rhsim02G0208900 Rhododendron simsii HOM05D013973 ORTHO05D000001 2.7e-06 57.0 62 43.5
Gohir.A06G098402 Gossypium hirsutum HOM05D000023 ORTHO05D000014 4.6e-06 56.2 50 52.0
TAR500G0002 Trochodendron aralioides HOM05D000023 ORTHO05D000014 7.8e-06 55.5 59 54.2


User provided reference genes

Program Settings