Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G044501 Manihot esculenta HOM05D003246 ORTHO05D003686 1.3e-28 129.0 66 100.0
Manes.14G119000 Manihot esculenta HOM05D003246 ORTHO05D003686 2.1e-10 68.6 61 65.6
BraA03t13620Z Brassica rapa HOM05D003246 ORTHO05D003686 6.8e-09 63.5 64 53.1
A03p44830 Brassica napus HOM05D003246 ORTHO05D003686 8.9e-09 63.2 64 53.1
Atru.chr7.2008 Acer truncatum HOM05D003246 ORTHO05D003686 3.4e-08 61.2 54 59.3
Cpa.g.sc277.1 Carica papaya HOM05D003246 ORTHO05D003686 3.4e-08 61.2 54 59.3
Cpa.g.sc46.62 Carica papaya HOM05D003246 ORTHO05D003686 3.4e-08 61.2 54 59.3
BcaC01g03134 Brassica carinata HOM05D003246 ORTHO05D003686 9.8e-08 59.7 61 54.1
C03p55720 Brassica napus HOM05D003246 ORTHO05D003686 9.8e-08 59.7 61 54.1
BolC3t17852H Brassica oleracea HOM05D003246 ORTHO05D003686 9.8e-08 59.7 61 54.1
Gohir.D06G051100 Gossypium hirsutum HOM05D003246 ORTHO05D003686 1.7e-07 58.9 61 52.5
Gorai.010G059300 Gossypium raimondii HOM05D003246 ORTHO05D003686 1.7e-07 58.9 61 52.5
Sabra18G0100000 Salix brachista HOM05D003246 ORTHO05D003686 1.7e-07 58.9 54 57.4
Sabra18G0101800 Salix brachista HOM05D003246 ORTHO05D003686 1.7e-07 58.9 54 57.4
SpUN0284_0010 Schrenkiella parvula HOM05D003246 ORTHO05D003686 1.7e-07 58.9 54 59.3
TWI34G0275 Tripterygium wilfordii HOM05D003246 ORTHO05D003686 1.7e-07 58.9 61 54.1
Carub.0003s2773 Capsella rubella HOM05D003246 ORTHO05D003686 2.2e-07 58.5 66 53.0
Gohir.A06G052100 Gossypium hirsutum HOM05D003246 ORTHO05D003686 2.9e-07 58.2 61 50.8
Potri.018G121300 Populus trichocarpa HOM05D003246 ORTHO05D003686 4.9e-07 57.4 54 55.6
AL3G44850 Arabidopsis lyrata HOM05D003246 ORTHO05D003686 6.4e-07 57.0 54 55.6
Aa31sc200G40 Aethionema arabicum HOM05D003246 ORTHO05D003686 8.3e-07 56.6 54 57.4
AT2G11890 Arabidopsis thaliana HOM05D003246 ORTHO05D003686 1.4e-06 55.8 54 55.6
FvH4_6g29260 Fragaria vesca HOM05D003246 ORTHO05D003686 1.4e-06 55.8 61 50.8
FAN14G0577 Fragaria x ananassa HOM05D003246 ORTHO05D003686 1.4e-06 55.8 61 50.8
Thecc.06G032400 Theobroma cacao HOM05D003246 ORTHO05D003686 1.4e-06 55.8 54 53.7
CARHR105000 Cardamine hirsuta HOM05D003246 ORTHO05D003686 1.9e-06 55.5 67 49.3
Migut.J01245 Erythranthe guttata HOM05D003246 ORTHO05D003686 1.9e-06 55.5 65 50.8
Duzib187G0063 Durio zibethinus HOM05D003246 ORTHO05D003686 2.4e-06 55.1 61 49.2
Nn8g39641 Nelumbo nucifera HOM05D003246 ORTHO05D003686 2.4e-06 55.1 61 50.8
Thecc.09G137100 Theobroma cacao HOM05D003246 ORTHO05D003686 2.4e-06 55.1 61 50.8
Ciclev10009554m.g Citrus clementina HOM05D003246 ORTHO05D003686 3.2e-06 54.7 68 50.0
BcaB08g34520 Brassica carinata HOM05D003246 ORTHO05D003686 4.1e-06 54.3 55 58.2
Potri.006G062000 Populus trichocarpa HOM05D003246 ORTHO05D003686 5.4e-06 53.9 54 53.7
RcHm_v2.0_Chr2g0134431 Rosa chinensis HOM05D003246 ORTHO05D003686 7.0e-06 53.5 61 50.8
GSVIVG01017455001 Vitis vinifera HOM05D003246 ORTHO05D003686 7.0e-06 53.5 61 50.8


User provided reference genes

Program Settings