Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 7.8e-41 171.0 171 100.0
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 6.9e-29 131.3 171 84.2
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 1.0e-19 100.9 83 62.7
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 1.0e-19 100.9 84 60.7
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 2.9e-19 99.4 84 58.3
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 8.4e-19 97.8 83 57.8
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 1.9e-18 96.7 84 58.3
TWI63G1030 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 2.5e-18 96.3 84 60.7
TWI63G1311 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 2.5e-18 96.3 84 60.7
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 7.1e-18 94.7 81 59.3
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 7.1e-18 94.7 83 59.0
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 2.1e-17 93.2 82 62.2
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 3.5e-17 92.4 83 59.0
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 3.5e-17 92.4 82 58.5
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 2.3e-16 89.7 84 53.6
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 3.0e-16 89.4 84 58.3
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 6.7e-16 88.2 82 56.1
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 1.9e-15 86.7 78 57.7
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 2.5e-15 86.3 83 53.0
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.3e-15 85.5 78 56.4
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.3e-15 85.5 78 59.0
TWI34G2014 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 4.3e-15 85.5 80 58.8
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 1.1e-13 80.9 78 52.6
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 1.1e-13 80.9 82 50.0
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 3.1e-13 79.3 75 56.0
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.1e-13 79.3 75 56.0
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 4.1e-13 79.0 85 48.2
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 5.3e-13 78.6 82 51.2
FAN28G1178 Fragaria x ananassa HOM05D008165 ORTHO05D007516 9.0e-13 77.8 96 46.9
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.0e-13 77.8 78 55.1
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 4.5e-12 75.5 76 55.3
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 7.6e-12 74.7 75 52.0
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.0e-11 74.3 68 55.9
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 1.3e-11 73.9 80 48.8
Glyma.13G163302 Glycine max HOM05D008165 ORTHO05D007516 2.9e-11 72.8 84 51.2
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 2.9e-11 72.8 87 47.1
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 3.8e-11 72.4 68 52.9
CsaV3_2G003360 Cucumis sativus L. HOM05D008165 ORTHO05D007516 3.8e-11 72.4 80 47.5
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 5.0e-11 72.0 86 50.0
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 8.4e-11 71.2 86 48.8
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 1.1e-10 70.9 79 53.2
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 1.4e-10 70.5 84 48.8
Glyma.17G107600 Glycine max HOM05D008165 ORTHO05D007516 5.5e-10 68.6 82 51.2
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 5.5e-10 68.6 88 44.3
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 7.1e-10 68.2 68 52.9
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.3e-10 67.8 71 53.5
GSVIVG01017457001 Vitis vinifera HOM05D009923 ORTHO05D007516 9.3e-10 67.8 71 50.7
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 1.2e-09 67.4 68 52.9
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 3.5e-09 65.9 77 45.5
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 6.1e-09 65.1 68 51.5
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 7.9e-09 64.7 84 44.0
Sed0004036 Sechium edule HOM05D008165 ORTHO05D007516 7.9e-09 64.7 68 48.5
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.0e-08 64.3 90 41.1
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 2.3e-08 63.2 85 47.1
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 6.7e-08 61.6 48 62.5
Manes.04G109000 Manihot esculenta HOM05D008165 ORTHO05D007516 8.7e-08 61.2 78 46.2
Cpa.g.sc46.64 Carica papaya HOM05D008165 ORTHO05D007516 1.5e-07 60.5 39 69.2
THA.LOC104815296 Tarenaya hassleriana HOM05D010884 ORTHO05D007516 1.9e-07 60.1 85 45.9
Sed0001322 Sechium edule HOM05D008165 ORTHO05D007516 2.5e-07 59.7 61 50.8
Glyma.13G163100 Glycine max HOM05D013093 ORTHO05D007516 3.3e-07 59.3 82 47.6
Phvul.003G172200 Phaseolus vulgaris HOM05D013093 ORTHO05D007516 3.3e-07 59.3 82 45.1
VMungo1215G3371 Vigna mungo HOM05D013093 ORTHO05D007516 3.3e-07 59.3 84 42.9
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 4.3e-07 58.9 63 49.2
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 5.7e-07 58.5 64 48.4
Psat4g034960 Pisum sativum HOM05D013093 ORTHO05D007516 5.7e-07 58.5 78 43.6
Sed0008944 Sechium edule HOM05D008165 ORTHO05D007516 9.7e-07 57.8 57 56.1
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 1.3e-06 57.4 88 42.0
MD15G1129000 Malus domestica HOM05D014178 ORTHO05D007516 1.6e-06 57.0 87 42.5
Hund09307 Selenicereus undatus HOM05D008165 ORTHO05D007516 4.8e-06 55.5 79 40.5
CiPaw.08G009200 Carya illinoinensis HOM05D009923 ORTHO05D007516 6.3e-06 55.1 78 43.6


User provided reference genes

Program Settings