Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G036800 Manihot esculenta HOM05D000129 ORTHO05D000997 1.2e-35 152.9 95 100.0
Manes.18G047600 Manihot esculenta HOM05D000129 ORTHO05D000997 3.2e-20 101.7 59 94.9
QL12p038296 Quercus lobata HOM05D000129 ORTHO05D000997 2.1e-19 99.0 60 88.3
Manes.09G019001 Manihot esculenta HOM05D000129 ORTHO05D000997 2.7e-19 98.6 60 90.0
Eucgr.F02237 Eucalyptus grandis HOM05D000129 ORTHO05D000997 6.1e-19 97.4 60 88.3
Potri.014G014700 Populus trichocarpa HOM05D000129 ORTHO05D000997 8.0e-19 97.1 60 86.7
Glyma.04G046700 Glycine max HOM05D000129 ORTHO05D000997 1.0e-18 96.7 60 88.3
Lalb_Chr23g0267561 Lupinus albus HOM05D000129 ORTHO05D000997 1.4e-18 96.3 60 88.3
PGR031G0208 Punica granatum HOM05D000129 ORTHO05D000997 1.4e-18 96.3 60 86.7
arahy.Tifrunner.gnm1.ann1.2ZDN53 Arachis hypogaea HOM05D000129 ORTHO05D000997 1.8e-18 95.9 60 85.0
arahy.Tifrunner.gnm1.ann1.NRZN5K Arachis hypogaea HOM05D000129 ORTHO05D000997 1.8e-18 95.9 60 85.0
Sabra14G0008800 Salix brachista HOM05D000129 ORTHO05D000997 1.8e-18 95.9 60 85.0
VMungo1309G1806 Vigna mungo HOM05D000129 ORTHO05D000997 1.8e-18 95.9 60 85.0
Potri.002G117400 Populus trichocarpa HOM05D000129 ORTHO05D000997 3.0e-18 95.1 59 88.1
Prupe.1G421100 Prunus persica HOM05D000129 ORTHO05D000997 3.0e-18 95.1 60 85.0
CANSAT11G2151 Cannabis sativa HOM05D000129 ORTHO05D000997 4.0e-18 94.7 60 85.0
MD08G1080200 Malus domestica HOM05D000129 ORTHO05D000997 4.0e-18 94.7 60 85.0
Oeu053077.1 Olea europaea HOM05D000129 ORTHO05D000997 4.0e-18 94.7 60 85.0
Phvul.009G072800 Phaseolus vulgaris HOM05D000129 ORTHO05D000997 4.0e-18 94.7 60 85.0
CiPaw.07G173500 Carya illinoinensis HOM05D000129 ORTHO05D000997 5.2e-18 94.4 60 86.7
Ca_15897_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000997 5.2e-18 94.4 60 86.7
MD15G1067300 Malus domestica HOM05D000129 ORTHO05D000997 5.2e-18 94.4 60 83.3
RcHm_v2.0_Chr6g0309841 Rosa chinensis HOM05D000129 ORTHO05D000997 5.2e-18 94.4 60 83.3
Cpa.g.sc142.46 Carica papaya HOM05D000129 ORTHO05D000997 6.8e-18 94.0 60 86.7
THA.LOC104816765 Tarenaya hassleriana HOM05D000129 ORTHO05D000997 6.8e-18 94.0 60 85.0
Duzib093G1703 Durio zibethinus HOM05D000129 ORTHO05D000997 8.8e-18 93.6 60 86.7
Sc15g0005610 Simmondsia chinensis HOM05D000129 ORTHO05D000997 1.2e-17 93.2 60 86.7
Atru.chr13.850 Acer truncatum HOM05D000129 ORTHO05D000997 1.5e-17 92.8 60 83.3
Medtr3g103270 Medicago truncatula HOM05D000129 ORTHO05D000997 1.5e-17 92.8 60 85.0
CSS0014514 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 83.3
Ciclev10000142m.g Citrus clementina HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 86.7
Dinv44942 Davidia involucrata HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 83.3
Gohir.A05G210900 Gossypium hirsutum HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 86.7
Gorai.009G220900 Gossypium raimondii HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 86.7
Hma1.2p1_1170F.1_g263330 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 81.7
Hma1.2p1_1170F.1_g263340 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 2.0e-17 92.4 60 81.7
Sed0025438 Sechium edule HOM05D000129 ORTHO05D000997 2.6e-17 92.0 60 83.3
Thecc.08G086700 Theobroma cacao HOM05D000129 ORTHO05D000997 2.6e-17 92.0 60 85.0
GSVIVG01009320001 Vitis vinifera HOM05D000129 ORTHO05D000997 2.6e-17 92.0 60 81.7
Actinidia19583 Actinidia chinensis HOM05D000129 ORTHO05D000997 3.4e-17 91.7 60 83.3
Cc10_g05070 Coffea canephora HOM05D000129 ORTHO05D000997 3.4e-17 91.7 60 83.3
CsaV3_2G026010 Cucumis sativus L. HOM05D000129 ORTHO05D000997 3.4e-17 91.7 60 81.7
Lj4C73G4 Lonicera japonica HOM05D000129 ORTHO05D000997 3.4e-17 91.7 60 81.7
Nn5g30632 Nelumbo nucifera HOM05D000129 ORTHO05D000997 4.4e-17 91.3 60 83.3
ATR0739G155 Amborella trichopoda HOM05D000129 ORTHO05D000997 5.7e-17 90.9 60 80.0
CAN.G674.46 Capsicum annuum HOM05D000129 ORTHO05D000997 5.7e-17 90.9 60 83.3
ClCG08G016600 Citrullus lanatus HOM05D000129 ORTHO05D000997 5.7e-17 90.9 60 80.0
Solyc07g022790.4 Solanum lycopersicum HOM05D000129 ORTHO05D000997 5.7e-17 90.9 60 83.3
EL10Ac8g19856 Beta vulgaris HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 81.7
AUR62036019 Chenopodium quinoa HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 83.3
FvH4_2g32870 Fragaria vesca HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 81.7
FAN24G2434 Fragaria x ananassa HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 81.7
SEGI_00929 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 81.7
SEGI_16687 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 7.5e-17 90.5 60 81.7
Lj1g0005699 Lotus japonicus HOM05D000129 ORTHO05D000997 9.8e-17 90.1 60 81.7
PSO541G1994 Papaver somniferum HOM05D000129 ORTHO05D000997 9.8e-17 90.1 59 84.7
Psat5g037880 Pisum sativum HOM05D000129 ORTHO05D000997 9.8e-17 90.1 60 80.0
Rhsim07G0219200 Rhododendron simsii HOM05D000129 ORTHO05D000997 9.8e-17 90.1 60 81.7
vmacro22048 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 9.8e-17 90.1 60 81.7
Aqoxy6G02557 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 1.3e-16 89.7 60 83.3
COL.COLO4_28480 Corchorus olitorius HOM05D000129 ORTHO05D000997 1.3e-16 89.7 60 81.7
PSO675G3743 Papaver somniferum HOM05D000129 ORTHO05D000997 1.3e-16 89.7 59 84.7
Sopen07g012030 Solanum pennellii HOM05D000129 ORTHO05D000997 1.3e-16 89.7 60 81.7
Gohir.D05G214200 Gossypium hirsutum HOM05D000129 ORTHO05D000997 1.7e-16 89.4 60 85.0
Nitab4.5_0005915g0030 Nicotiana tabacum HOM05D000129 ORTHO05D000997 1.7e-16 89.4 60 81.7
TAR381G1656 Trochodendron aralioides HOM05D000129 ORTHO05D000997 1.7e-16 89.4 60 81.7
DCAR_027593 Daucus carota HOM05D000129 ORTHO05D000997 2.8e-16 88.6 60 78.3
SalBow2G1224 Salvia bowleyana HOM05D000129 ORTHO05D000997 2.8e-16 88.6 60 80.0
SGA_v2.0_scaffold152G36819 Striga asiatica HOM05D000129 ORTHO05D000997 4.8e-16 87.8 60 78.3
AL1G20820 Arabidopsis lyrata HOM05D000129 ORTHO05D000997 6.3e-16 87.4 60 83.3
AT1G10130 Arabidopsis thaliana HOM05D000129 ORTHO05D000997 6.3e-16 87.4 60 83.3
Carub.0001s0954 Capsella rubella HOM05D000129 ORTHO05D000997 6.3e-16 87.4 60 83.3
Migut.N02792 Erythranthe guttata HOM05D000129 ORTHO05D000997 6.3e-16 87.4 60 78.3
Aa31LG1G4760 Aethionema arabicum HOM05D000129 ORTHO05D000997 1.1e-15 86.7 60 81.7
HPP92_020533 Vanilla planifolia HOM05D000129 ORTHO05D000997 1.8e-15 85.9 59 79.7
BcaB08g37332 Brassica carinata HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
BcaC05g24810 Brassica carinata HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
BcaC07g41841 Brassica carinata HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
A06p06780 Brassica napus HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
A09p65190 Brassica napus HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
C05p08260 Brassica napus HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
BolC5t29577H Brassica oleracea HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
BolC8t52446H Brassica oleracea HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
BraA09t41862Z Brassica rapa HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
CDE01G0303 Ceratophyllum demersum HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 78.3
ECA232G0094 Erigeron canadensis HOM05D000129 ORTHO05D000997 2.4e-15 85.5 59 81.4
Thhalv10006682m.g Eutrema salsugineum HOM05D000129 ORTHO05D000997 2.4e-15 85.5 60 81.7
C08p49110 Brassica napus HOM05D000129 ORTHO05D000997 3.1e-15 85.1 60 80.0
HanXRQChr12g0368611 Helianthus annuus HOM05D000129 ORTHO05D000997 3.1e-15 85.1 59 83.1
Lsat_1_v5_gn_9_76580 Lactuca sativa HOM05D000129 ORTHO05D000997 3.1e-15 85.1 59 81.4
BraA06t23893Z Brassica rapa HOM05D000129 ORTHO05D000997 9.1e-15 83.6 58 82.8
Sp1g08760 Schrenkiella parvula HOM05D000129 ORTHO05D000997 3.5e-14 81.6 60 80.0
SMO268G0052 Selaginella moellendorffii HOM05D000129 ORTHO05D000997 4.5e-14 81.3 60 71.7
AagrBONN_evm.TU.Sc2ySwM_344.3348 Anthoceros agrestis HOM05D000129 ORTHO05D000997 7.7e-14 80.5 60 71.7
Mapoly0044s0031 Marchantia polymorpha HOM05D000129 ORTHO05D000997 3.8e-13 78.2 60 70.0
Pp3c11_7920 Physcomitrium patens HOM05D000129 ORTHO05D000997 6.5e-13 77.4 60 68.3
FAN15G0647 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.2e-11 73.2 45 82.2
FAN27G3321 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.2e-11 73.2 45 82.2
CBR_g19685 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-09 65.9 59 59.3
Haze_26714 Corylus avellana HOM05D000129 ORTHO05D000997 2.2e-08 62.4 57 56.1
Cre11.g467795 Chlamydomonas reinhardtii HOM05D000129 ORTHO05D000997 2.8e-08 62.0 60 58.3
MCO01G703 Micromonas commoda HOM05D000129 ORTHO05D000997 5.4e-07 57.8 60 56.7
PRCOL_00006536 Prasinoderma coloniale HOM05D000129 ORTHO05D000997 9.2e-07 57.0 60 58.3


User provided reference genes

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