Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G033475 Manihot esculenta HOM05D009258 ORTHO05D001516 6.2e-143 510.8 254 100.0
Manes.02G191950 Manihot esculenta HOM05D009258 ORTHO05D009356 1.7e-28 130.6 112 56.2
Medtr3g048390 Medicago truncatula HOM05D008558 ORTHO05D011658 3.8e-15 86.3 169 27.2
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.1e-14 84.7 164 30.5
Psat4g086840 Pisum sativum HOM05D007807 ORTHO05D001516 1.9e-14 84.0 137 30.7
Lj4g0000095 Lotus japonicus HOM05D002777 ORTHO05D001516 3.2e-14 83.2 208 25.5
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 3.2e-14 83.2 170 23.5
Psat0s287g0120 Pisum sativum HOM05D007807 ORTHO05D001516 9.3e-14 81.6 143 29.4
Lj3g0022675 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-13 81.3 166 26.5
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-13 80.9 229 29.3
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-13 80.9 229 29.3
LjContig00155g0012392 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-13 80.9 166 28.9
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-13 80.9 174 24.7
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 2.7e-13 80.1 136 26.5
Thecc.03G167900 Theobroma cacao HOM05D009258 ORTHO05D009583 3.5e-13 79.7 160 25.6
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 1.0e-12 78.2 171 25.1
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-12 78.2 231 24.2
Lj5g0003150 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-12 77.8 206 26.2
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-12 77.8 239 23.4
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.3e-12 77.0 158 27.2
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-12 76.6 165 26.1
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 3.0e-12 76.6 226 27.9
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 6.7e-12 75.5 159 26.4
Psat5g231960 Pisum sativum HOM05D007807 ORTHO05D001516 6.7e-12 75.5 142 29.6
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 8.7e-12 75.1 142 29.6
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 1.5e-11 74.3 231 22.9
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 1.5e-11 74.3 142 28.9
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 1.9e-11 73.9 164 25.6
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 1.9e-11 73.9 144 29.2
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 1.9e-11 73.9 142 29.6
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-11 73.6 145 28.3
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 3.3e-11 73.2 166 22.9
LjContig00081g0007509 Lotus japonicus HOM05D002777 ORTHO05D001516 3.3e-11 73.2 170 26.5
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-11 72.8 238 22.3
Psat0s1058g0320 Pisum sativum HOM05D007807 ORTHO05D001516 4.3e-11 72.8 139 29.5
Psat5g137320 Pisum sativum HOM05D007807 ORTHO05D001516 4.3e-11 72.8 139 29.5
Psat0ss2562g0120 Pisum sativum HOM05D007807 ORTHO05D001516 7.4e-11 72.0 138 29.0
Psat1g199520 Pisum sativum HOM05D007807 ORTHO05D001516 7.4e-11 72.0 139 29.5
Lj2g0000729 Lotus japonicus HOM05D002777 ORTHO05D001516 9.6e-11 71.6 163 26.4
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 9.6e-11 71.6 163 25.8
Thecc.02G220600 Theobroma cacao HOM05D009258 ORTHO05D009583 9.6e-11 71.6 128 27.3
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-10 70.9 138 29.0
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-10 70.9 153 28.1
Potri.017G044300 Populus trichocarpa HOM05D002777 ORTHO05D001516 1.6e-10 70.9 167 29.3
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 2.8e-10 70.1 135 28.1
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 2.8e-10 70.1 142 28.2
Psat3g168120 Pisum sativum HOM05D007807 ORTHO05D001516 2.8e-10 70.1 135 28.1
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 2.8e-10 70.1 144 25.7
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-10 69.7 151 29.1
Psat1g119760 Pisum sativum HOM05D007807 ORTHO05D001516 3.6e-10 69.7 126 31.0
Psat3g174320 Pisum sativum HOM05D007807 ORTHO05D001516 3.6e-10 69.7 139 28.8
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 3.6e-10 69.7 124 30.6
Psat4g225800 Pisum sativum HOM05D007807 ORTHO05D001516 1.1e-09 68.2 152 29.6
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-09 67.8 168 23.8
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 1.4e-09 67.8 173 25.4
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 2.4e-09 67.0 127 29.1
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-09 66.2 167 25.1
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 4.0e-09 66.2 159 23.9
Medtr1148s0010 Medicago truncatula HOM05D008558 ORTHO05D001516 1.5e-08 64.3 161 22.4
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 2.0e-08 63.9 140 27.9
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-08 63.9 123 29.3
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.0e-08 63.9 137 21.9
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.6e-08 63.5 174 24.7
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-08 63.2 130 24.6
EL10Ac6g15260 Beta vulgaris HOM05D008976 ORTHO05D011121 4.5e-08 62.8 161 29.8
EL10Ac1g00211 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-08 62.4 161 29.2
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-08 62.4 136 27.9
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-08 62.4 257 19.1
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-08 62.4 137 25.5
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 7.6e-08 62.0 120 25.0
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 7.6e-08 62.0 178 23.0
EL10Ac8g18673 Beta vulgaris HOM05D008976 ORTHO05D011121 9.9e-08 61.6 161 28.0
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 9.9e-08 61.6 172 23.3
Lsat_1_v5_gn_4_170541 Lactuca sativa HOM05D003915 ORTHO05D005386 1.3e-07 61.2 160 21.9
Lj2g0005531 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-07 61.2 91 29.7
Psat3g059880 Pisum sativum HOM05D007807 ORTHO05D001516 1.3e-07 61.2 187 24.6
EL10Ac2g04471 Beta vulgaris HOM05D008976 ORTHO05D011121 1.7e-07 60.8 160 30.6
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-07 60.8 137 24.8
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.7e-07 60.8 123 26.8
ECA232G2727 Erigeron canadensis HOM05D008939 ORTHO05D011516 2.2e-07 60.5 169 23.7
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-07 60.5 178 23.0
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 3.8e-07 59.7 133 27.8
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 4.9e-07 59.3 164 28.0
Lsat_1_v5_gn_4_126240 Lactuca sativa HOM05D008939 ORTHO05D011516 4.9e-07 59.3 125 24.0
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 4.9e-07 59.3 150 25.3
HanXRQChr11g0339091 Helianthus annuus HOM05D003915 ORTHO05D005386 8.4e-07 58.5 169 20.7
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.4e-07 58.5 174 23.6
HanXRQChr08g0228311 Helianthus annuus HOM05D003915 ORTHO05D005386 1.1e-06 58.2 123 25.2
HanXRQChr16g0525111 Helianthus annuus HOM05D003915 ORTHO05D005386 1.1e-06 58.2 124 26.6
Lj5g0005649 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.2 167 21.6
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 1.1e-06 58.2 93 33.3
Lj6g0001957 Lotus japonicus HOM05D002777 ORTHO05D000006 1.4e-06 57.8 132 28.0
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 1.9e-06 57.4 95 28.4
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 1.9e-06 57.4 95 28.4
HanXRQChr05g0132981 Helianthus annuus HOM05D003915 ORTHO05D005386 2.4e-06 57.0 171 22.2
HanXRQChr14g0428581 Helianthus annuus HOM05D003915 ORTHO05D005386 2.4e-06 57.0 122 26.2
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-06 57.0 158 21.5
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.2e-06 56.6 116 25.0
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 4.2e-06 56.2 167 26.9
HanXRQChr12g0362641 Helianthus annuus HOM05D003915 ORTHO05D005386 4.2e-06 56.2 124 26.6
Lsat_1_v5_gn_2_8421 Lactuca sativa HOM05D008939 ORTHO05D011516 4.2e-06 56.2 199 23.1
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 4.2e-06 56.2 219 22.8
ECA248G0911 Erigeron canadensis HOM05D000003 ORTHO05D011516 7.1e-06 55.5 160 23.8
Thecc.08G019000 Theobroma cacao HOM05D023671 ORTHO05D000006 7.1e-06 55.5 163 24.5
Lj2g0003501 Lotus japonicus HOM05D002777 ORTHO05D001516 9.3e-06 55.1 166 22.3
Medtr4g027930 Medicago truncatula HOM05D008558 ORTHO05D001516 9.3e-06 55.1 137 24.1
Sc02g0007350 Simmondsia chinensis HOM05D011136 ORTHO05D010856 9.3e-06 55.1 106 24.5


User provided reference genes

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