Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 1.1e-60 236.5 123 100.0
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 8.2e-32 140.6 121 62.0
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 1.1e-28 130.2 98 67.3
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 1.9e-28 129.4 118 56.8
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.2e-27 126.7 98 65.3
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 4.6e-27 124.8 119 58.0
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 4.6e-27 124.8 120 56.7
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 2.3e-26 122.5 119 57.1
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 3.9e-26 121.7 119 53.8
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 8.7e-26 120.6 117 57.3
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 1.1e-25 120.2 118 53.4
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.5e-25 119.8 106 60.4
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.5e-25 119.0 106 60.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 2.5e-25 119.0 94 62.8
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 3.3e-25 118.6 125 54.4
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 5.7e-25 117.9 96 63.5
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 5.7e-25 117.9 121 55.4
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 5.7e-25 117.9 119 52.1
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 5.7e-25 117.9 122 54.9
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 7.4e-25 117.5 120 55.8
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.6e-24 116.3 122 52.5
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 8.2e-24 114.0 86 67.4
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 8.2e-24 114.0 94 57.4
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.1e-23 113.6 120 54.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 4.1e-23 111.7 104 58.7
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 5.3e-23 111.3 122 52.5
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 5.3e-23 111.3 116 56.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 6.9e-23 110.9 119 49.6
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 9.0e-23 110.5 119 53.8
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 9.0e-23 110.5 86 67.4
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 1.2e-22 110.2 97 56.7
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.2e-22 110.2 85 63.5
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 2.0e-22 109.4 98 54.1
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 3.4e-22 108.6 89 61.8
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 3.4e-22 108.6 122 47.5
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 4.5e-22 108.2 116 51.7
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 5.9e-22 107.8 112 55.4
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 5.9e-22 107.8 89 61.8
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 7.6e-22 107.5 122 45.9
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.3e-21 106.7 106 54.7
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.3e-21 106.7 116 50.9
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.2e-21 105.9 121 47.1
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.2e-21 105.9 93 57.0
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 2.9e-21 105.5 80 65.0
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 5.0e-21 104.8 167 41.9
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 8.5e-21 104.0 111 46.8
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.1e-20 103.6 111 45.9
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.4e-20 103.2 87 60.9
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 1.9e-20 102.8 111 45.9
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.9e-20 102.8 105 53.3
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 2.5e-20 102.4 95 54.7
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 2.5e-20 102.4 92 54.3
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 2.5e-20 102.4 90 60.0
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 3.2e-20 102.1 85 57.6
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 3.2e-20 102.1 129 46.5
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 4.2e-20 101.7 86 60.5
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 4.2e-20 101.7 121 44.6
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 7.2e-20 100.9 93 50.5
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 7.2e-20 100.9 93 50.5
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 9.3e-20 100.5 95 51.6
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 9.3e-20 100.5 87 57.5
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 1.2e-19 100.1 89 58.4
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.6e-19 99.8 121 43.8
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.6e-19 99.8 109 49.5
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 2.7e-19 99.0 101 46.5
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 3.6e-19 98.6 122 48.4
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 4.6e-19 98.2 89 57.3
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 4.6e-19 98.2 84 57.1
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 6.1e-19 97.8 93 50.5
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 6.1e-19 97.8 84 63.1
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 7.9e-19 97.4 106 46.2
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.0e-18 97.1 93 51.6
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.0e-18 97.1 108 51.9
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.4e-18 96.7 87 52.9
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 2.3e-18 95.9 95 50.5
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 2.3e-18 95.9 93 48.4
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 2.3e-18 95.9 93 48.4
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 2.3e-18 95.9 97 51.5
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.0e-18 95.5 82 58.5
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 3.0e-18 95.5 83 56.6
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 3.0e-18 95.5 110 50.9
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 3.9e-18 95.1 111 45.0
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 1.5e-17 93.2 82 54.9
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 1.5e-17 93.2 82 54.9
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 1.5e-17 93.2 77 55.8
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 4.3e-17 91.7 67 67.2
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.3e-16 90.1 74 52.7
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 1.7e-16 89.7 59 64.4
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.1e-15 87.0 97 44.3
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 2.4e-15 85.9 71 62.0
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 5.0e-13 78.2 58 58.6
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.2e-11 73.6 96 40.6
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.0e-10 68.9 85 42.4
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 2.6e-09 65.9 119 31.9
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 5.7e-09 64.7 59 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 3.1e-07 58.9 113 30.1


User provided reference genes

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