Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 0.0e+00 1260.4 621 100.0
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 4.3e-307 1057.4 622 84.1
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 3.7e-306 1054.3 626 81.5
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 4.1e-305 1050.8 621 82.1
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 3.8e-303 1044.3 648 79.8
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 1.6e-301 1038.9 619 82.2
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.0e-300 1036.2 622 82.6
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.0e-300 1036.2 622 82.6
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 3.9e-300 1034.2 620 82.1
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.5e-299 1032.3 619 81.6
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 2.0e-299 1031.9 620 80.5
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 2.0e-299 1031.9 611 82.0
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 9.7e-299 1029.6 619 81.3
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 1.7e-298 1028.9 570 85.6
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 5.0e-295 1017.3 576 83.9
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 5.0e-295 1017.3 570 85.4
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 4.7e-293 1010.7 621 79.2
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 8.0e-293 1010.0 623 78.8
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 1.0e-292 1009.6 569 84.2
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.4e-292 1009.2 631 78.3
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 5.2e-292 1007.3 593 81.6
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 1.1e-291 1006.1 569 83.7
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.0e-291 1005.4 619 78.8
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 2.0e-291 1005.4 571 83.5
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.0e-291 1005.4 634 78.1
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 9.7e-291 1003.0 569 83.7
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 4.8e-290 1000.7 621 79.4
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 8.2e-290 1000.0 621 78.7
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 3.1e-289 998.0 633 79.3
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 3.1e-289 998.0 629 78.1
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 1.6e-288 995.7 579 81.7
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 2.6e-288 995.0 579 81.5
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 4.5e-288 994.2 676 74.1
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 5.9e-288 993.8 659 75.1
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 7.7e-288 993.4 620 78.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 2.9e-287 991.5 631 78.1
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 6.5e-287 990.3 731 70.0
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 8.5e-287 989.9 583 81.8
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.1e-286 989.6 583 81.8
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 1.5e-286 989.2 583 81.6
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 1.9e-286 988.8 583 81.6
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 3.0e-284 981.5 621 77.6
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 6.7e-284 980.3 593 80.4
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 2.6e-283 978.4 616 77.8
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 4.4e-283 977.6 593 79.6
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 3.7e-282 974.5 623 77.2
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 6.3e-282 973.8 618 77.5
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 8.2e-282 973.4 567 81.3
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.4e-281 972.6 611 78.1
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.8e-281 972.2 622 77.0
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 3.1e-281 971.5 652 75.5
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 4.1e-281 971.1 619 77.4
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 2.7e-280 968.4 570 81.9
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 2.7e-280 968.4 626 76.2
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 5.9e-280 967.2 580 81.2
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.0e-279 966.5 586 80.2
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 8.5e-279 963.4 586 78.7
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 9.4e-278 959.9 622 76.8
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 1.6e-277 959.1 615 76.3
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 1.6e-277 959.1 624 75.5
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 1.5e-275 952.6 616 73.9
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 2.0e-275 952.2 576 80.2
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 2.6e-275 951.8 629 76.8
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 4.4e-275 951.0 593 78.6
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 1.1e-273 946.4 587 80.6
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 5.4e-273 944.1 567 80.6
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 7.0e-273 943.7 576 79.7
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 1.2e-272 943.0 592 77.9
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 7.7e-272 940.3 622 75.1
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 7.7e-272 940.3 582 79.0
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 3.8e-271 937.9 615 75.3
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 5.0e-271 937.6 595 75.6
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.1e-270 936.4 628 74.7
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 3.3e-270 934.9 700 66.6
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 5.5e-270 934.1 591 77.7
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 7.2e-270 933.7 567 78.3
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 1.6e-269 932.6 580 78.3
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 2.1e-269 932.2 627 75.4
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 8.9e-268 926.8 573 79.2
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.0e-263 913.3 592 74.7
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 6.6e-263 910.6 540 82.2
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 5.6e-262 907.5 583 75.5
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 5.8e-259 897.5 543 78.8
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 2.5e-254 882.1 542 78.8
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 1.8e-252 875.9 619 70.8
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 3.1e-252 875.2 528 79.7
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 1.4e-241 839.7 460 86.1
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 2.4e-241 839.0 587 66.8
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 1.2e-237 826.6 570 68.6
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 3.1e-236 822.0 460 83.7
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 1.9e-230 802.7 487 79.5
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 8.7e-223 777.3 471 78.3
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.4e-212 743.4 489 73.6
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 1.7e-210 736.5 440 80.2
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 2.4e-204 716.1 463 74.7
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 7.4e-198 694.5 397 82.1
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.3e-194 683.7 633 58.0
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.7e-194 683.3 604 61.6
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 5.0e-194 681.8 529 62.0
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 2.2e-162 576.6 353 77.9
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 2.1e-160 570.1 461 61.8
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.8e-159 567.0 427 68.4
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 3.1e-156 556.2 623 51.0
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 5.9e-147 525.4 318 79.2
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 2.0e-142 510.4 310 75.2
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 1.4e-127 461.1 560 45.0
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.1e-127 459.9 267 81.3
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 4.3e-121 439.5 232 87.5
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 6.8e-119 432.2 287 75.6
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.8e-111 407.5 238 81.9
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.2e-99 368.2 593 36.6
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.0e-86 324.3 221 72.4
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.5e-83 313.5 177 83.6
Lj9A687T77 Lonicera japonica HOM05D000306 ORTHO05D007657 2.6e-70 270.8 195 71.8
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 4.7e-59 233.4 187 66.8
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.8e-55 221.5 121 86.0
HanXRQChr09g0255811 Helianthus annuus HOM05D000306 ORTHO05D007657 3.2e-52 210.7 125 82.4
SEGI_25583 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 8.8e-50 202.6 134 70.1
arahy.Tifrunner.gnm1.ann1.ID2I7H Arachis hypogaea HOM05D000306 ORTHO05D007657 4.4e-49 200.3 128 75.8
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 3.1e-47 194.1 538 29.6
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 3.7e-40 170.6 560 26.8
Aqoxy3G01525 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 6.3e-40 169.9 88 87.5
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 6.3e-40 169.9 552 28.4
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 6.8e-34 149.8 105 65.7
DCAR_020114 Daucus carota HOM05D000306 ORTHO05D007657 8.9e-26 122.9 127 55.9
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 3.4e-25 120.9 82 69.5
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 1.9e-23 115.2 82 67.1
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 2.4e-23 114.8 64 78.1
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 3.5e-22 110.9 69 81.2
CAN.G790.37 Capsicum annuum HOM05D000306 ORTHO05D007657 4.7e-19 100.5 55 81.8
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 4.4e-17 94.0 66 69.7
RcHm_v2.0_Chr4g0405021 Rosa chinensis HOM05D000306 ORTHO05D030075 8.3e-16 89.7 59 78.0
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 1.7e-13 82.0 56 78.6
arahy.Tifrunner.gnm1.ann1.QZT5UT Arachis hypogaea HOM05D000200 ORTHO05D010534 3.3e-12 77.8 50 74.0
SMO271G0060 Selaginella moellendorffii HOM05D003206 ORTHO05D005207 3.3e-12 77.8 555 21.6
FAN09G0310 Fragaria x ananassa HOM05D003206 ORTHO05D005207 2.1e-11 75.1 536 22.4
Glyma.07G028600 Glycine max HOM05D003206 ORTHO05D005207 2.1e-11 75.1 530 21.1
TPR.G18960 Trifolium pratense HOM05D000306 ORTHO05D007657 2.1e-11 75.1 43 83.7
MSTRG.11155 Avicennia marina HOM05D003206 ORTHO05D005207 3.6e-11 74.3 530 21.3
unitig_699.g19091 Utricularia gibba HOM05D003206 ORTHO05D005207 3.6e-11 74.3 562 20.3
FAN02G2065 Fragaria x ananassa HOM05D003206 ORTHO05D005207 4.7e-11 73.9 536 22.4
FAN02G2439 Fragaria x ananassa HOM05D003206 ORTHO05D005207 4.7e-11 73.9 536 22.4
FvH4_6g29330 Fragaria vesca HOM05D003206 ORTHO05D005207 1.8e-10 72.0 536 22.2
PSO017G7051 Papaver somniferum HOM05D003206 ORTHO05D005207 2.3e-10 71.6 536 20.5
FAN14G4723 Fragaria x ananassa HOM05D003206 ORTHO05D005207 4.0e-10 70.9 538 21.6
FAN05G2875 Fragaria x ananassa HOM05D003206 ORTHO05D005207 5.2e-10 70.5 536 22.2
SGA_v2.0_scaffold5G02725 Striga asiatica HOM05D003206 ORTHO05D005207 5.2e-10 70.5 534 21.5
PSO170G1430 Papaver somniferum HOM05D003206 ORTHO05D005207 8.9e-10 69.7 536 20.3
TPR.G20440 Trifolium pratense HOM05D000306 ORTHO05D050985 5.8e-09 67.0 39 79.5
RcHm_v2.0_Chr2g0134571 Rosa chinensis HOM05D003206 ORTHO05D005207 7.6e-09 66.6 537 21.8
Cpa.g.sc10.151 Carica papaya HOM05D003206 ORTHO05D005207 2.9e-08 64.7 534 20.0
SEGI_06294 Sequoiadendron giganteum HOM05D003206 ORTHO05D005207 2.9e-08 64.7 551 21.2
SEGI_29302 Sequoiadendron giganteum HOM05D000306 ORTHO05D050985 8.4e-08 63.2 39 74.4
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 9.2e-07 59.7 42 71.4
FAN02G3805 Fragaria x ananassa HOM05D003206 ORTHO05D005207 4.6e-06 57.4 527 22.2


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