Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 3.4e-216 755.0 463 100.0
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.2e-64 251.5 466 44.8
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.2e-59 235.0 499 41.1
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 1.6e-59 234.6 510 38.0
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 5.6e-57 226.1 609 36.3
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.2e-56 224.9 531 39.0
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.8e-55 221.1 528 39.8
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 1.5e-54 218.0 431 42.5
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.1e-52 211.8 517 38.5
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 3.2e-52 210.3 543 36.5
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 3.0e-50 203.8 487 38.6
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 5.0e-50 203.0 512 39.1
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 8.6e-50 202.2 482 41.9
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.5e-49 201.4 481 36.6
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 2.8e-48 197.2 494 37.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.7e-48 196.4 478 36.8
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 8.0e-48 195.7 478 36.0
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 1.0e-47 195.3 514 36.6
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 1.8e-47 194.5 460 40.2
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.2e-46 191.8 559 34.7
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.5e-46 191.4 473 37.8
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 7.5e-46 189.1 518 36.7
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 9.8e-46 188.7 228 53.9
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 2.2e-45 187.6 489 35.6
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.9e-45 187.2 430 38.4
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 8.3e-45 185.7 430 37.4
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.1e-44 185.3 463 38.7
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 7.0e-44 182.6 462 36.4
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 2.0e-43 181.0 517 33.8
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.0e-42 178.7 499 37.1
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.7e-42 177.9 454 35.7
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 5.0e-42 176.4 601 32.9
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.9e-41 174.5 303 44.9
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 1.9e-41 174.5 429 37.1
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.5e-41 174.1 434 40.3
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 4.3e-41 173.3 469 34.5
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 4.3e-41 173.3 464 36.0
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 7.3e-41 172.6 432 37.3
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 9.5e-41 172.2 439 35.1
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 6.2e-40 169.5 487 34.3
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.4e-39 168.3 459 35.1
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 3.1e-39 167.2 453 35.1
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 4.0e-39 166.8 462 35.3
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.5e-38 164.9 453 35.3
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.7e-37 161.4 454 33.3
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 2.9e-37 160.6 452 34.5
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 6.4e-37 159.5 462 34.4
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 3.2e-36 157.1 475 34.5
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 4.1e-36 156.8 501 32.1
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 5.4e-36 156.4 459 34.4
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 7.1e-36 156.0 464 34.9
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 7.1e-36 156.0 571 30.6
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 9.2e-36 155.6 459 34.9
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 1.2e-35 155.2 481 32.4
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 2.7e-35 154.1 226 46.5
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 2.7e-35 154.1 281 47.0
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 3.5e-35 153.7 460 34.3
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 6.0e-35 152.9 240 44.2
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 1.0e-34 152.1 295 41.0
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 2.3e-34 151.0 196 50.5
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 5.1e-34 149.8 465 34.0
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 8.6e-34 149.1 285 42.1
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 5.6e-33 146.4 134 60.4
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 7.3e-33 146.0 457 32.4
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 9.5e-33 145.6 424 34.0
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 9.5e-33 145.6 318 39.6
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 2.1e-32 144.4 423 35.0
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 4.7e-32 143.3 419 37.7
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 8.1e-32 142.5 459 33.1
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.1e-31 142.1 104 73.1
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 1.8e-31 141.4 119 63.9
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.1e-31 140.6 114 64.9
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 3.1e-31 140.6 114 64.9
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 3.1e-31 140.6 432 31.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 4.0e-31 140.2 467 34.7
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 5.2e-31 139.8 120 64.2
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 5.2e-31 139.8 457 32.8
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.2e-30 138.7 463 30.2
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.2e-30 138.7 521 30.1
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 9.9e-30 135.6 498 33.5
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 9.9e-30 135.6 258 43.4
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.3e-29 135.2 524 30.5
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.7e-29 134.8 427 31.9
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 1.7e-29 134.8 85 75.3
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 2.9e-29 134.0 431 34.6
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.1e-28 132.1 461 30.2
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 2.4e-28 131.0 436 30.7
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 4.1e-28 130.2 457 32.8
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 1.2e-27 128.6 182 47.8
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.6e-27 128.3 462 30.1
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.6e-27 128.3 113 58.4
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 4.6e-27 126.7 483 29.6
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 7.8e-27 125.9 278 38.8
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.0e-26 125.6 486 32.1
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.7e-26 124.8 477 30.8
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 6.6e-26 122.9 466 31.3
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 8.6e-26 122.5 532 30.8
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-25 122.1 103 62.1
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-25 122.1 103 62.1
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.5e-25 120.9 432 29.9
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 3.3e-25 120.6 447 30.2
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.6e-24 117.1 442 31.7
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 4.7e-24 116.7 589 29.0
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 8.1e-24 115.9 157 44.6
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 9.0e-23 112.5 456 29.4
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 9.0e-23 112.5 456 29.4
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 9.0e-23 112.5 456 29.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.2e-22 112.1 225 41.3
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.2e-22 112.1 246 38.6
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 3.4e-22 110.5 423 30.5
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.7e-21 108.2 468 29.7
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 2.9e-21 107.5 79 70.9
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 6.4e-21 106.3 99 58.6
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 5.4e-20 103.2 99 57.6
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 7.1e-20 102.8 62 77.4
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 9.3e-20 102.4 73 67.1
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 9.3e-20 102.4 252 38.5
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 2.1e-19 101.3 421 33.7
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 1.3e-18 98.6 189 41.8
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 2.3e-18 97.8 438 28.3
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 3.0e-18 97.4 422 29.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 3.0e-18 97.4 90 57.8
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.9e-18 97.1 328 31.4
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 4.5e-14 83.6 256 33.6
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 3.8e-13 80.5 473 30.2
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 1.6e-11 75.1 91 49.5
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.6e-11 73.6 406 27.8
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.8e-10 71.6 81 54.3
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.9e-10 70.5 80 53.8
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 3.3e-09 67.4 158 38.0
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.6e-08 65.1 35 82.9
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.6e-08 65.1 35 82.9


User provided reference genes

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