Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G007451 Manihot esculenta HOM05D006707 ORTHO05D008243 5.1e-38 161.8 182 100.0
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.7e-09 67.0 39 79.5
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.2e-09 66.6 179 59.8
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 2.9e-09 66.2 43 72.1
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 2.9e-09 66.2 41 78.0
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 3.8e-09 65.9 41 78.0
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.8e-09 65.9 41 78.0
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 3.8e-09 65.9 41 78.0
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 3.8e-09 65.9 41 78.0
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 4.9e-09 65.5 41 78.0
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 4.9e-09 65.5 41 75.6
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 1.1e-08 64.3 41 75.6
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 1.4e-08 63.9 43 74.4
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.9e-08 63.5 41 75.6
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.9e-08 63.5 41 68.3
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 1.9e-08 63.5 170 40.6
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 2.4e-08 63.2 41 73.2
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 2.4e-08 63.2 43 74.4
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 3.2e-08 62.8 40 75.0
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.2e-08 62.4 41 65.9
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 4.2e-08 62.4 41 73.2
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 5.5e-08 62.0 41 73.2
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 9.3e-08 61.2 41 70.7
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 9.3e-08 61.2 41 61.0
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 1.2e-07 60.8 43 65.1
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 3.5e-07 59.3 41 65.9
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.5e-07 59.3 41 70.7
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 3.5e-07 59.3 41 70.7
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 4.6e-07 58.9 37 75.7
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 1.0e-06 57.8 41 65.9
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.3e-06 57.4 40 65.0
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 1.3e-06 57.4 39 66.7
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 1.8e-06 57.0 38 68.4
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.8e-06 57.0 43 67.4
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 1.8e-06 57.0 36 63.9
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 2.3e-06 56.6 41 63.4
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 5.1e-06 55.5 41 58.5
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 6.7e-06 55.1 41 63.4
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 8.7e-06 54.7 41 58.5


User provided reference genes

Program Settings