Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 1.3e-54 216.1 107 100.0
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.4e-11 73.2 67 59.7
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 9.0e-11 70.5 68 58.8
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 9.0e-11 70.5 70 52.9
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.5e-10 69.7 68 55.9
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 2.0e-10 69.3 68 55.9
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 3.4e-10 68.6 67 58.2
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 4.5e-10 68.2 66 56.1
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 4.5e-10 68.2 66 53.0
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.8e-10 67.8 70 50.0
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 5.8e-10 67.8 70 50.0
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 5.8e-10 67.8 68 54.4
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 7.6e-10 67.4 69 53.6
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.0e-09 67.0 66 56.1
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 1.3e-09 66.6 66 53.0
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.7e-09 66.2 70 52.9
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 2.9e-09 65.5 67 56.7
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 6.5e-09 64.3 70 48.6
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 6.5e-09 64.3 68 55.9
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 8.4e-09 63.9 67 50.7
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.1e-08 63.5 64 54.7
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.1e-08 63.5 68 48.5
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.5e-08 62.4 64 54.7
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 2.5e-08 62.4 67 50.7
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 3.2e-08 62.0 67 53.7
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 4.2e-08 61.6 68 47.1
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.5e-08 61.2 68 51.5
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 7.1e-08 60.8 64 51.6
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 7.1e-08 60.8 69 50.7
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 7.1e-08 60.8 73 50.7
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 9.3e-08 60.5 69 47.8
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-07 59.7 73 50.7
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-07 59.7 73 50.7
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-07 59.7 73 50.7
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.1e-07 59.3 69 46.4
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.1e-07 59.3 67 53.7
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 2.7e-07 58.9 68 48.5
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.5e-07 58.5 76 44.7
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 3.5e-07 58.5 68 47.1
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 4.6e-07 58.2 68 48.5
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.0e-06 57.0 68 45.6
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.3e-06 56.6 66 45.5
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.3e-06 56.6 73 47.9
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.3e-06 56.6 69 46.4
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.8e-06 56.2 68 48.5
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.8e-06 56.2 69 46.4
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.3e-06 55.8 68 45.6
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 3.9e-06 55.1 69 50.7
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 5.1e-06 54.7 66 43.9
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 5.1e-06 54.7 66 47.0
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.1e-06 54.7 73 45.2
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 6.7e-06 54.3 68 45.6
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 8.7e-06 53.9 67 46.3


User provided reference genes

Program Settings