Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G202400 Manihot esculenta HOM05D007680 ORTHO05D009702 2.0e-72 275.8 149 100.0
ClCG05G021580 Citrullus lanatus HOM05D007680 ORTHO05D009702 1.3e-28 130.2 129 63.6
CsaV3_5G035650 Cucumis sativus L. HOM05D007680 ORTHO05D009702 3.9e-28 128.6 124 64.5
MELO3C012366.2 Cucumis melo HOM05D007680 ORTHO05D009702 5.1e-28 128.3 153 56.2
Sed0005690 Sechium edule HOM05D007680 ORTHO05D009702 6.2e-26 121.3 124 59.7
Duzib128G1419 Durio zibethinus HOM05D007680 ORTHO05D009702 1.4e-25 120.2 163 51.5
Haze_02610 Corylus avellana HOM05D007680 ORTHO05D009702 2.4e-25 119.4 166 50.0
FAN03G2755 Fragaria x ananassa HOM05D007680 ORTHO05D009702 3.1e-25 119.0 117 59.8
Potri.008G025700 Populus trichocarpa HOM05D007680 ORTHO05D009702 3.1e-25 119.0 160 53.8
Thecc.10G109800 Theobroma cacao HOM05D007680 ORTHO05D009702 5.2e-25 118.2 156 50.6
Thecc.K0008600 Theobroma cacao HOM05D007680 ORTHO05D009702 5.2e-25 118.2 156 50.6
TAR636G0370 Trochodendron aralioides HOM05D007680 ORTHO05D009702 1.2e-24 117.1 157 53.5
COL.COLO4_33896 Corchorus olitorius HOM05D007680 ORTHO05D009702 4.9e-23 111.7 164 54.9
CiPaw.14G028600 Carya illinoinensis HOM05D007680 ORTHO05D009702 8.4e-23 110.9 167 47.9
Gohir.A05G288200 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.9e-22 109.8 160 49.4
Gohir.D05G289400 Gossypium hirsutum HOM05D007680 ORTHO05D009702 1.9e-22 109.8 161 50.9
Hma1.2p1_0026F.1_g016760 Hydrangea macrophylla HOM05D007680 ORTHO05D009702 1.9e-22 109.8 151 49.0
FAN06G0858 Fragaria x ananassa HOM05D007680 ORTHO05D009702 2.4e-22 109.4 117 57.3
Cfa011226 Carpinus fangiana HOM05D007680 ORTHO05D009702 3.2e-22 109.0 165 48.5
vmacro10277 Vaccinium macrocarpon HOM05D007680 ORTHO05D009702 3.2e-22 109.0 149 50.3
Nn2g14013 Nelumbo nucifera HOM05D007680 ORTHO05D009702 5.4e-22 108.2 159 49.7
Sopen11g003400 Solanum pennellii HOM05D007680 ORTHO05D009702 7.1e-22 107.8 146 50.7
Oeu060261.1 Olea europaea HOM05D007680 ORTHO05D009702 1.2e-21 107.1 153 50.3
PGSC0003DMG400027341 Solanum tuberosum HOM05D007680 ORTHO05D009702 1.2e-21 107.1 143 51.7
MD07G1087200 Malus domestica HOM05D007680 ORTHO05D009702 1.6e-21 106.7 171 48.0
GSVIVG01034708001 Vitis vinifera HOM05D007680 ORTHO05D009702 1.6e-21 106.7 110 59.1
QL04p041248 Quercus lobata HOM05D007680 ORTHO05D009702 2.7e-21 105.9 168 46.4
Prupe.2G086600 Prunus persica HOM05D007680 ORTHO05D009702 3.5e-21 105.5 162 46.9
TAR636G3254 Trochodendron aralioides HOM05D007680 ORTHO05D009702 3.5e-21 105.5 123 58.5
Gorai.009G304500 Gossypium raimondii HOM05D007680 ORTHO05D009702 4.6e-21 105.1 161 49.7
Dinv30655 Davidia involucrata HOM05D007680 ORTHO05D009702 7.8e-21 104.4 129 51.2
CSS0013494 Camellia sinensis var. sinensis HOM05D007680 ORTHO05D009702 1.3e-20 103.6 81 70.4
Cpa.g.sc128.47 Carica papaya HOM05D007680 ORTHO05D009702 1.7e-20 103.2 163 46.0
CDE08G1572 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 2.3e-20 102.8 129 51.9
Ciclev10032885m.g Citrus clementina HOM05D007680 ORTHO05D009702 2.3e-20 102.8 166 48.2
PGR044G0006 Punica granatum HOM05D007680 ORTHO05D009702 3.0e-20 102.4 110 61.8
Potri.010G234900 Populus trichocarpa HOM05D007680 ORTHO05D009702 3.9e-20 102.1 158 51.3
Actinidia31090 Actinidia chinensis HOM05D007680 ORTHO05D009702 5.1e-20 101.7 105 59.0
Migut.F01656 Erythranthe guttata HOM05D007680 ORTHO05D009702 6.6e-20 101.3 155 47.7
SalBow6G1777 Salvia bowleyana HOM05D007680 ORTHO05D009702 6.6e-20 101.3 139 50.4
CDE02G0611 Ceratophyllum demersum HOM05D007680 ORTHO05D009702 8.7e-20 100.9 154 46.1
Atru.chr12.970 Acer truncatum HOM05D007680 ORTHO05D009702 1.5e-19 100.1 106 58.5
Aqoxy2G01382 Aquilegia oxysepala HOM05D007680 ORTHO05D009702 1.9e-19 99.8 151 48.3
Ah.10g034230 Amaranthus hybridus HOM05D007680 ORTHO05D009702 2.5e-19 99.4 152 48.0
Phvul.007G245300 Phaseolus vulgaris HOM05D007680 ORTHO05D009702 5.6e-19 98.2 136 49.3
EL10Ac2g03857 Beta vulgaris HOM05D007680 ORTHO05D009702 7.3e-19 97.8 155 47.7
RcHm_v2.0_Chr1g0333251 Rosa chinensis HOM05D007680 ORTHO05D009702 1.6e-18 96.7 74 73.0
MBI17_g11658_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 4.8e-18 95.1 94 61.7
ATR0820G188 Amborella trichopoda HOM05D007680 ORTHO05D009702 8.1e-18 94.4 92 67.4
VMungo0720G1600 Vigna mungo HOM05D007680 ORTHO05D009702 1.1e-17 94.0 113 56.6
HanXRQChr08g0217901 Helianthus annuus HOM05D007680 ORTHO05D009702 1.4e-17 93.6 158 44.9
TWI38G2267 Tripterygium wilfordii HOM05D007680 ORTHO05D009702 1.8e-17 93.2 165 45.5
Lj2C27T21 Lonicera japonica HOM05D007680 ORTHO05D009702 4.0e-17 92.0 109 53.2
Sc20g0001300 Simmondsia chinensis HOM05D007680 ORTHO05D009702 4.0e-17 92.0 67 76.1
PSO384G1244 Papaver somniferum HOM05D007680 ORTHO05D009702 6.9e-17 91.3 136 49.3
TAR636G2061 Trochodendron aralioides HOM05D007680 ORTHO05D009702 6.9e-17 91.3 87 66.7
Glyma.02G165700 Glycine max HOM05D007680 ORTHO05D009702 7.6e-16 87.8 77 64.9
Medtr1g050700 Medicago truncatula HOM05D007680 ORTHO05D009702 7.6e-16 87.8 149 45.6
Sabra10G0182100 Salix brachista HOM05D007680 ORTHO05D009702 7.6e-16 87.8 61 72.1
Lalb_Chr01g0010321 Lupinus albus HOM05D007680 ORTHO05D009702 9.9e-16 87.4 73 68.5
unitig_899.g15034 Utricularia gibba HOM05D007680 ORTHO05D009702 2.2e-15 86.3 99 53.5
arahy.Tifrunner.gnm1.ann1.VK4BH4 Arachis hypogaea HOM05D007680 ORTHO05D009702 3.8e-15 85.5 76 63.2
THA.LOC104824894 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 1.4e-14 83.6 145 44.1
THA.LOC104824900 Tarenaya hassleriana HOM05D007680 ORTHO05D009702 1.4e-14 83.6 149 43.0
Psat6g094320 Pisum sativum HOM05D007680 ORTHO05D009702 2.4e-14 82.8 74 67.6
Sp7g35810 Schrenkiella parvula HOM05D007680 ORTHO05D009702 2.4e-14 82.8 97 58.8
Carub.0007s0203 Capsella rubella HOM05D007680 ORTHO05D009702 4.2e-14 82.0 97 60.8
Hund17353 Selenicereus undatus HOM05D007680 ORTHO05D009702 4.2e-14 82.0 66 63.6
AL7G12370 Arabidopsis lyrata HOM05D007680 ORTHO05D009702 5.4e-14 81.6 79 65.8
Lsat_1_v5_gn_2_102521 Lactuca sativa HOM05D007680 ORTHO05D009702 5.4e-14 81.6 161 41.0
AT4G40045 Arabidopsis thaliana HOM05D007680 ORTHO05D009702 7.1e-14 81.3 132 47.7
Thhalv10026523m.g Eutrema salsugineum HOM05D007680 ORTHO05D009702 7.1e-14 81.3 142 45.1
MD07G1069500 Malus domestica HOM05D007680 ORTHO05D009702 9.3e-14 80.9 105 48.6
TPR.G305 Trifolium pratense HOM05D007680 ORTHO05D009702 9.3e-14 80.9 65 75.4
TPR.G7612 Trifolium pratense HOM05D007680 ORTHO05D009702 9.3e-14 80.9 65 75.4
Lj6g0009049 Lotus japonicus HOM05D007680 ORTHO05D009702 1.2e-13 80.5 122 45.1
Lalb_Chr19g0129271 Lupinus albus HOM05D007680 ORTHO05D009702 2.7e-13 79.3 73 63.0
SEGI_03872 Sequoiadendron giganteum HOM05D007680 ORTHO05D009702 2.3e-12 76.3 106 51.9
CARHR246610 Cardamine hirsuta HOM05D007680 ORTHO05D009702 6.7e-12 74.7 123 47.2
A01p00970 Brassica napus HOM05D007680 ORTHO05D009702 1.1e-11 73.9 79 63.3
BraA01t00095Z Brassica rapa HOM05D007680 ORTHO05D009702 1.1e-11 73.9 79 63.3
AUR62043943 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.9e-11 73.2 88 47.7
Zm00001eb411120 Zea mays HOM05D007680 ORTHO05D009702 3.3e-11 72.4 74 59.5
BolC1t00107H Brassica oleracea HOM05D007680 ORTHO05D009702 4.3e-11 72.0 59 78.0
C01p01090 Brassica napus HOM05D007680 ORTHO05D009702 9.6e-11 70.9 59 76.3
SGA_v2.0_scaffold10G05320 Striga asiatica HOM05D007680 ORTHO05D009702 8.1e-10 67.8 116 40.5
Zm00001eb004510 Zea mays HOM05D007680 ORTHO05D009702 2.4e-09 66.2 102 48.0
arahy.Tifrunner.gnm1.ann1.UIS3VC Arachis hypogaea HOM05D007680 ORTHO05D009702 9.0e-09 64.3 94 47.9
Os12g0206700 Oryza sativa ssp. japonica HOM05D007680 ORTHO05D009702 2.0e-08 63.2 98 49.0
Glyma.10G104651 Glycine max HOM05D007680 ORTHO05D009702 1.7e-07 60.1 74 48.6
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 1.1e-06 57.4 62 50.0
MBI17_g15050_MAGBIO Magnolia biondii HOM05D007680 ORTHO05D009702 2.4e-06 56.2 113 38.9


User provided reference genes

Program Settings