Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 6.6e-146 520.8 281 100.0
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-122 443.7 258 88.0
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-117 426.8 258 92.2
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 4.8e-104 381.7 258 86.0
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 5.0e-101 371.7 236 89.8
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.2e-100 369.0 267 76.8
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-98 362.8 243 86.4
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 4.1e-95 352.1 263 79.8
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-94 349.4 263 80.2
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-90 335.9 218 87.6
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 3.9e-90 335.5 257 77.0
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-89 333.2 257 73.9
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-86 323.9 257 75.1
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 3.2e-55 219.5 125 92.0
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 2.3e-53 213.4 235 53.6
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 5.6e-52 208.8 253 48.6
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 4.6e-46 189.1 265 45.3
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 8.6e-45 184.9 256 48.0
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 4.3e-44 182.6 268 44.0
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 5.6e-44 182.2 271 44.3
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 8.9e-42 174.9 253 46.6
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 6.4e-40 168.7 229 45.9
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.9e-39 167.2 235 45.1
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 7.1e-39 165.2 261 42.9
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 6.0e-38 162.2 258 41.5
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 6.0e-38 162.2 224 44.2
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 6.0e-38 162.2 245 40.8
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 7.8e-38 161.8 255 45.9
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 1.0e-37 161.4 255 42.4
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.3e-37 161.0 249 46.2
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-36 157.9 236 42.4
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-36 157.9 279 39.1
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.5e-36 157.5 248 49.2
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.9e-36 157.1 242 44.2
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.2e-35 154.5 236 45.8
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.6e-35 154.1 242 45.0
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 1.6e-35 154.1 248 38.3
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.1e-35 153.7 248 38.3
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 6.2e-35 152.1 237 45.1
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.4e-34 151.0 233 42.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.8e-34 150.6 252 48.8
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 2.4e-34 150.2 248 37.9
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 3.1e-34 149.8 236 41.1
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 3.1e-34 149.8 250 40.0
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 5.2e-34 149.1 254 45.3
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 5.2e-34 149.1 268 39.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.5e-33 147.5 242 45.0
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 2.0e-33 147.1 249 45.0
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 4.4e-33 146.0 251 39.0
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.7e-32 144.1 235 41.3
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.9e-32 142.5 255 40.0
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 4.9e-32 142.5 246 40.2
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.4e-31 141.0 249 40.2
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 9.2e-31 138.3 237 36.7
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.2e-30 137.9 252 39.3
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.2e-30 137.9 236 40.7
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 1.6e-30 137.5 238 48.3
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.6e-30 136.0 238 45.0
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 7.8e-30 135.2 255 42.0
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 7.8e-30 135.2 254 39.4
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.7e-29 134.0 254 39.0
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 3.0e-29 133.3 254 39.0
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.5e-28 131.0 232 40.1
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 4.3e-28 129.4 247 37.2
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 7.3e-28 128.6 239 40.2
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 2.8e-27 126.7 220 38.2
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 2.8e-27 126.7 253 40.3
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 4.7e-27 125.9 226 39.4
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.5e-25 120.9 234 39.7
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 2.0e-25 120.6 264 35.2
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 1.7e-24 117.5 242 38.4
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.9e-24 116.7 231 37.2
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 5.4e-23 112.5 230 35.7
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 7.8e-22 108.6 236 38.6
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.7e-21 107.5 230 36.1
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 3.9e-21 106.3 239 36.4
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.5e-20 104.4 149 43.0
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 4.3e-20 102.8 249 36.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.3e-19 101.3 240 37.9
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.6e-19 100.9 234 35.9
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 2.1e-19 100.5 236 35.2
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 3.6e-19 99.8 244 36.1
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 4.8e-19 99.4 234 34.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 8.1e-19 98.6 245 38.0
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.1e-18 98.2 143 42.0
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.4e-18 97.8 245 37.6
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 9.0e-18 95.1 141 44.7
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.5e-17 94.4 250 34.0
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.9e-15 87.4 132 44.7
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 7.9e-14 82.0 107 44.9
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 2.5e-12 77.0 75 53.3
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 9.6e-12 75.1 184 35.9
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.4e-10 71.2 216 29.2
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 6.9e-10 68.9 131 37.4


User provided reference genes

Program Settings