Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 1.5e-217 759.2 389 100.0
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.8e-170 602.8 392 79.1
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.1e-151 540.4 392 69.6
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 3.6e-142 508.8 392 67.3
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 2.9e-139 499.2 384 65.9
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.9e-138 496.5 365 67.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.0e-136 490.7 389 64.0
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 2.3e-136 489.6 388 63.1
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 6.6e-136 488.0 389 64.0
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 1.9e-135 486.5 412 61.7
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 3.3e-135 485.7 384 64.1
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.3e-135 485.7 384 64.6
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 3.3e-135 485.7 389 63.8
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 3.3e-135 485.7 389 64.3
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.8e-133 479.9 395 62.0
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 5.8e-132 474.9 396 61.9
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.9e-131 472.6 387 62.5
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 3.7e-131 472.2 396 61.1
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 3.7e-131 472.2 390 62.3
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 3.7e-131 472.2 401 61.6
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.9e-130 469.9 385 62.9
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.2e-129 467.2 385 62.9
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 4.6e-129 465.3 358 66.2
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 6.0e-129 464.9 399 60.4
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 3.0e-128 462.6 333 67.3
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 3.9e-128 462.2 385 61.0
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.9e-127 459.9 387 60.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 7.3e-127 458.0 394 60.7
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 6.2e-126 454.9 386 60.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.1e-125 454.1 387 61.8
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 1.8e-125 453.4 398 59.0
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 3.1e-125 452.6 386 60.6
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 1.5e-124 450.3 386 60.6
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 1.7e-123 446.8 385 60.3
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.2e-123 446.4 385 60.5
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 6.4e-123 444.9 385 59.7
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.9e-122 443.4 387 60.7
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 5.4e-122 441.8 384 59.9
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 5.4e-122 441.8 386 59.1
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 2.3e-120 436.4 397 58.2
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 2.5e-119 433.0 382 60.2
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.3e-119 432.6 385 60.3
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 7.3e-119 431.4 340 63.5
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.6e-118 430.3 391 57.0
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 2.1e-118 429.9 387 58.4
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 5.2e-117 425.2 372 58.3
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 6.8e-117 424.9 391 57.5
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 6.8e-117 424.9 393 56.2
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.5e-116 423.7 384 55.5
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 1.5e-116 423.7 391 55.8
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.0e-116 423.3 389 57.6
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.9e-115 419.5 386 58.8
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 1.1e-114 417.5 387 57.1
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.9e-114 416.8 381 57.2
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 5.4e-114 415.2 386 55.2
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.6e-113 413.7 398 54.8
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 3.5e-113 412.5 394 55.6
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 7.8e-113 411.4 391 55.5
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.0e-112 411.0 338 62.4
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 2.3e-112 409.8 390 55.4
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 3.0e-112 409.5 390 55.4
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 3.0e-112 409.5 391 54.5
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 8.7e-112 407.9 305 66.2
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 3.3e-111 406.0 389 54.5
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 3.3e-111 406.0 387 55.8
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 7.3e-111 404.8 387 51.9
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 3.6e-110 402.5 466 49.4
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 3.6e-110 402.5 396 54.0
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 8.1e-110 401.4 386 53.9
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.4e-109 400.6 398 53.5
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.4e-109 400.6 398 53.5
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 3.1e-109 399.4 340 59.7
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 6.9e-109 398.3 392 54.8
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 2.6e-108 396.4 388 55.2
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 9.9e-108 394.4 392 52.8
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 1.3e-107 394.0 392 52.8
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 2.9e-107 392.9 398 53.5
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 3.8e-107 392.5 398 53.5
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 3.8e-107 392.5 398 53.5
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 8.4e-107 391.3 391 55.0
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 7.1e-106 388.3 395 52.4
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.6e-105 387.1 389 52.4
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.9e-103 380.2 387 53.0
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 7.6e-100 368.2 325 58.2
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 8.4e-99 364.8 415 48.2
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 4.2e-98 362.5 399 49.1
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 2.7e-97 359.8 385 52.2
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 7.4e-95 351.7 393 49.6
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 6.2e-94 348.6 388 50.0
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 5.8e-92 342.0 294 60.2
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.3e-91 340.9 391 50.1
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 2.2e-91 340.1 361 50.1
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.2e-89 334.3 444 45.5
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 2.4e-85 320.1 267 62.5
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 5.3e-85 318.9 382 44.8
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 9.0e-85 318.2 382 44.8
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 7.9e-81 305.1 391 45.3
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.9e-79 300.4 257 58.0
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 1.1e-77 294.7 257 59.1
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.4e-74 281.6 381 42.3
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.4e-69 267.7 293 49.8
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.0e-67 261.5 237 61.6
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 3.8e-67 259.6 362 42.5
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 1.9e-66 257.3 384 41.4
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.6e-65 254.2 294 47.3
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 1.1e-63 248.1 281 50.2
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.4e-61 241.1 146 81.5
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 2.6e-55 220.3 280 46.8
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 3.1e-53 213.4 173 60.7
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 2.5e-50 203.8 403 34.2
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 9.4e-50 201.8 392 32.9
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.1e-41 172.6 239 42.7
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 2.0e-39 167.5 199 48.7
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.1e-37 161.8 380 32.4
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.8e-37 161.0 102 75.5
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.9e-34 151.0 340 31.5
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.0e-32 145.2 173 43.9
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 1.8e-32 144.4 169 47.3
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 7.0e-29 132.5 247 34.8
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.7e-27 127.9 173 40.5
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.4e-23 113.2 86 64.0
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 7.0e-21 105.9 136 43.4
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 3.9e-19 100.1 263 27.0
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 4.6e-12 76.6 105 36.2
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 9.9e-07 58.9 167 26.9


User provided reference genes

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