Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 9.2e-207 723.4 383 100.0
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.8e-131 472.6 384 68.8
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 6.4e-75 285.4 381 47.8
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.1e-74 282.7 389 45.5
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.1e-73 280.4 388 46.4
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.9e-71 273.9 377 48.8
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 4.7e-70 269.2 417 45.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.1e-66 258.1 376 43.4
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.7e-65 253.4 400 43.2
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.8e-65 251.9 387 45.2
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.0e-64 251.5 380 42.1
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.9e-64 249.6 394 43.4
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.1e-63 248.1 382 41.6
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.9e-63 247.3 418 43.1
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.8e-59 233.0 383 43.3
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 3.8e-59 233.0 387 42.1
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 3.5e-57 226.5 402 39.1
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 3.5e-57 226.5 380 43.7
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 3.5e-57 226.5 380 43.7
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.5e-52 211.1 378 41.3
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.9e-51 206.8 364 39.8
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 6.0e-49 199.1 376 38.3
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 3.0e-48 196.8 395 38.7
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.1e-47 194.9 302 46.0
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.8e-46 190.3 376 37.0
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.8e-46 190.3 387 34.9
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.6e-46 189.9 384 36.5
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.4e-45 188.0 384 37.0
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 2.4e-45 187.2 402 37.6
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 9.0e-45 185.3 379 35.6
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-44 184.9 380 38.9
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.5e-44 184.5 393 37.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.6e-44 183.7 375 34.9
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.5e-44 183.0 386 36.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 7.6e-44 182.2 373 37.5
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.2e-43 180.6 370 36.2
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.2e-43 180.6 376 37.5
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.4e-43 178.7 375 38.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.4e-42 177.9 366 36.9
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 7.9e-41 172.2 384 34.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 3.0e-40 170.2 381 38.1
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.1e-40 169.5 368 35.3
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.5e-39 167.9 377 33.7
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.5e-39 167.9 365 33.4
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.6e-39 166.0 370 37.0
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 6.9e-37 159.1 371 33.2
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.0e-36 157.5 387 33.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 4.5e-36 156.4 389 31.4
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.4e-34 151.4 396 32.8
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.9e-34 151.0 384 34.1
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.2e-34 149.8 360 33.1
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 5.5e-34 149.4 379 33.2
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.5e-33 146.7 373 32.2
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 3.5e-33 146.7 373 31.4
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-32 145.2 372 32.0
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.0e-32 145.2 372 32.0
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 8.7e-32 142.1 395 32.2
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.1e-31 141.7 378 32.3
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 7.4e-31 139.0 382 34.3
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.6e-30 137.9 399 30.6
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 2.8e-30 137.1 374 30.2
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 3.7e-30 136.7 377 34.0
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 4.8e-30 136.3 388 32.2
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 8.2e-30 135.6 403 30.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.8e-29 134.4 398 31.4
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.1e-29 133.7 380 30.5
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 3.1e-29 133.7 381 33.9
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.0e-28 131.0 196 42.3
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 5.9e-28 129.4 359 34.8
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.2e-27 127.5 392 29.8
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.2e-27 127.5 271 34.7
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 6.5e-27 125.9 374 33.2
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 4.2e-26 123.2 377 32.9
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.7e-25 120.6 371 29.1
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.6e-25 120.2 367 30.8
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.1e-25 119.4 167 44.3
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.0e-24 117.1 376 26.9
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 3.0e-24 117.1 383 29.5
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 3.0e-24 117.1 378 30.7
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 5.1e-24 116.3 361 30.2
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.1e-23 115.2 378 30.2
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 3.3e-23 113.6 378 30.7
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.3e-22 111.7 364 29.1
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.7e-22 110.2 384 30.5
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 3.7e-22 110.2 372 29.0
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 4.8e-22 109.8 378 29.6
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.8e-21 107.8 379 29.8
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.8e-21 107.8 357 28.6
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.8e-21 107.8 381 29.7
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.4e-21 107.5 389 30.3
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 3.1e-21 107.1 365 28.2
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.0e-20 104.4 159 43.4
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.3e-19 101.7 363 29.8
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.3e-19 101.7 363 29.8
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.3e-19 101.7 148 41.2
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.8e-19 100.1 197 36.5
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.4e-18 98.2 371 31.8
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 5.5e-18 96.3 364 28.8
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.2e-18 95.9 380 28.4
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 7.2e-18 95.9 374 28.1
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 9.4e-18 95.5 212 32.1
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.2e-17 95.1 378 24.3
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.6e-17 94.7 383 28.2
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.1e-17 94.4 295 28.5
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 2.7e-17 94.0 297 30.0
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 2.6e-15 87.4 392 26.0
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 2.8e-14 84.0 183 38.3
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.7e-14 83.6 377 26.8
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.7e-14 83.6 377 26.8
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 8.2e-14 82.4 368 27.7
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.6e-12 77.4 374 26.2
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.9e-12 76.3 96 41.7
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 2.9e-11 73.9 270 25.2
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 2.9e-11 73.9 116 36.2
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 5.0e-11 73.2 130 36.2
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 5.0e-11 73.2 370 24.6
HPP92_019577 Vanilla planifolia HOM05D025517 ORTHO05D019338 8.5e-11 72.4 373 24.1
Gohir.D01G111300 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.5e-10 69.7 363 25.3
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 6.1e-09 66.2 375 23.2
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.3e-06 58.5 152 34.9


User provided reference genes

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