Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 2.8e-33 144.8 79 100.0
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 4.9e-30 134.0 79 91.1
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.4e-29 131.7 79 91.1
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 2.7e-28 128.3 74 94.6
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 7.8e-28 126.7 74 93.2
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.3e-26 121.3 77 83.1
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 5.6e-26 120.6 77 81.8
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 7.3e-26 120.2 77 81.8
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 2.8e-25 118.2 77 81.8
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 6.2e-25 117.1 76 81.6
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 1.1e-24 116.3 77 80.5
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 2.4e-24 115.2 77 77.9
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.1e-24 114.8 74 83.8
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.1e-24 114.8 74 83.8
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.0e-24 114.4 76 81.6
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 2.6e-23 111.7 79 79.7
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 3.4e-23 111.3 75 77.3
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.4e-23 111.3 77 79.2
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 5.8e-23 110.5 77 79.2
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 5.8e-23 110.5 79 81.0
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 9.9e-23 109.8 77 77.9
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 9.9e-23 109.8 79 78.5
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 2.2e-22 108.6 72 79.2
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 2.2e-22 108.6 79 75.9
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 2.9e-22 108.2 75 77.3
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 6.4e-22 107.1 73 79.5
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 8.4e-22 106.7 75 74.7
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 8.4e-22 106.7 79 74.7
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.4e-21 105.9 75 78.7
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 4.2e-21 104.4 79 72.2
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 5.4e-21 104.0 75 73.3
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 5.4e-21 104.0 75 77.3
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 7.1e-21 103.6 77 72.7
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.6e-20 102.4 91 65.9
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 2.7e-20 101.7 75 70.7
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 4.6e-20 100.9 79 77.2
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 4.6e-20 100.9 78 70.5
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 6.0e-20 100.5 75 72.0
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 6.0e-20 100.5 75 74.7
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 7.8e-20 100.1 78 71.8
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 2.3e-19 98.6 79 75.9
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 2.3e-19 98.6 75 72.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 2.3e-19 98.6 75 72.0
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 1.5e-18 95.9 76 72.4
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.9e-18 95.5 78 66.7
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 3.3e-18 94.7 75 74.7
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 5.6e-18 94.0 75 68.0
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 7.3e-18 93.6 72 70.8
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 7.3e-18 93.6 72 70.8
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.3e-17 92.8 75 73.3
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.6e-17 92.4 72 70.8
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.6e-17 92.4 72 70.8
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.6e-17 92.4 79 70.9
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 2.1e-17 92.0 75 66.7
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 4.8e-17 90.9 90 62.2
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 4.8e-17 90.9 70 71.4
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 8.1e-17 90.1 79 67.1
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 8.1e-17 90.1 70 74.3
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 1.4e-16 89.4 70 74.3
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.8e-16 89.0 77 63.6
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 1.8e-16 89.0 75 64.0
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 3.1e-16 88.2 79 65.8
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 3.1e-16 88.2 72 68.1
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 5.3e-16 87.4 88 56.8
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.2e-15 86.3 75 62.7
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 3.4e-15 84.7 102 53.9
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 7.6e-15 83.6 74 63.5
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 7.6e-15 83.6 74 67.6
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 9.9e-15 83.2 92 57.6
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 8.4e-14 80.1 79 60.8
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 8.4e-14 80.1 80 62.5
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 1.4e-13 79.3 77 62.3
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 3.2e-13 78.2 80 65.0
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 5.4e-13 77.4 73 65.8
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 9.3e-13 76.6 93 54.8
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 1.6e-12 75.9 74 60.8
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.0e-11 73.2 74 60.8
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 3.3e-10 68.2 72 59.7
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 2.4e-08 62.0 79 48.1
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 3.1e-08 61.6 79 53.2
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 5.3e-08 60.8 74 52.7
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 2.2e-06 55.5 73 53.4
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 6.4e-06 53.9 74 48.6
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 8.4e-06 53.5 75 52.0


User provided reference genes

Program Settings