Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.3e-168 595.5 306 100.0
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.2e-121 440.3 291 82.5
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 8.0e-113 411.0 294 73.1
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 8.0e-113 411.0 294 73.1
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 8.0e-113 411.0 298 73.8
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 5.2e-112 408.3 304 71.4
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 4.4e-111 405.2 304 70.7
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 5.8e-111 404.8 303 70.6
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.7e-110 403.3 267 77.2
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.4e-109 400.2 298 71.8
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.0e-109 397.9 303 70.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 2.7e-108 396.0 296 69.6
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 2.7e-108 396.0 300 71.0
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 2.7e-108 396.0 302 71.2
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.7e-107 393.3 296 69.9
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 3.9e-107 392.1 301 70.1
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 8.6e-107 391.0 284 69.7
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 1.9e-106 389.8 286 72.7
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 5.6e-106 388.3 303 70.3
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 1.6e-105 386.7 284 73.6
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 3.6e-105 385.6 290 71.4
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 3.6e-105 385.6 296 69.6
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 4.7e-105 385.2 306 68.6
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 1.8e-104 383.3 308 68.2
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 6.8e-104 381.3 251 78.5
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 8.9e-104 380.9 278 71.9
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.2e-103 380.6 303 68.3
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 2.6e-103 379.4 295 69.8
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 7.5e-103 377.9 298 67.8
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 9.9e-103 377.5 303 67.7
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.3e-102 377.1 276 72.8
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.7e-102 376.7 278 72.3
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 4.9e-102 375.2 271 73.8
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 3.2e-101 372.5 302 66.9
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 4.1e-101 372.1 256 74.2
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 2.7e-100 369.4 253 75.5
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 1.3e-99 367.1 298 67.4
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.7e-99 366.7 263 72.2
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 3.9e-99 365.5 306 64.1
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 5.1e-99 365.2 298 66.1
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 5.1e-99 365.2 249 75.9
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 6.6e-99 364.8 303 66.7
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 8.6e-99 364.4 332 61.7
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 4.3e-98 362.1 305 65.6
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 4.3e-98 362.1 304 65.5
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 4.3e-98 362.1 302 64.9
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 9.5e-98 360.9 229 77.7
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.6e-97 360.1 299 64.5
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 8.1e-97 357.8 301 63.5
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 3.1e-96 355.9 296 64.9
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.2e-95 354.0 248 72.2
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 2.0e-95 353.2 263 68.8
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 2.6e-95 352.8 256 75.4
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 7.6e-95 351.3 285 66.3
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.7e-94 350.1 277 66.1
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 4.9e-94 348.6 253 68.8
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 6.4e-94 348.2 278 65.5
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 6.4e-94 348.2 257 68.5
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 8.4e-94 347.8 262 67.9
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.4e-93 347.1 302 60.9
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.4e-93 347.1 229 73.8
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.2e-92 344.0 285 64.2
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.1e-92 343.2 290 64.8
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 3.5e-92 342.4 288 63.2
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.5e-92 342.4 246 71.1
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 6.0e-92 341.7 301 63.5
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.7e-91 340.1 251 68.1
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 3.0e-91 339.3 266 66.2
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.9e-91 339.0 246 69.9
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.9e-90 336.7 305 59.0
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 3.3e-90 335.9 295 63.1
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 3.3e-90 335.9 375 54.1
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 4.3e-90 335.5 298 60.7
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 5.6e-90 335.1 287 65.2
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 6.2e-89 331.6 293 61.8
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 8.1e-89 331.3 310 59.7
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 8.1e-89 331.3 257 66.1
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 1.1e-88 330.9 278 62.9
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 2.4e-88 329.7 257 65.8
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 3.1e-88 329.3 257 66.1
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 4.0e-88 328.9 280 61.8
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 5.3e-88 328.6 237 69.2
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.2e-87 327.4 270 64.8
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 1.7e-86 323.6 264 62.1
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 6.4e-86 321.6 306 57.2
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 8.4e-86 321.2 288 58.0
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 1.4e-85 320.5 318 58.5
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.9e-85 320.1 299 56.5
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 2.4e-85 319.7 300 60.0
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 3.5e-84 315.8 266 62.4
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.0e-83 314.3 258 63.2
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 3.1e-80 302.8 419 44.6
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 5.3e-80 302.0 233 67.8
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 6.9e-80 301.6 332 51.8
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.3e-78 297.4 229 65.5
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 9.3e-77 291.2 190 77.9
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.8e-75 287.0 217 70.0
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.1e-72 277.7 194 71.6
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 5.8e-71 271.9 327 51.1
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 8.4e-70 268.1 254 58.3
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 3.2e-69 266.2 255 53.7
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 1.0e-67 261.2 240 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 1.5e-66 257.3 246 52.0
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.9e-66 256.9 312 46.2
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 3.3e-66 256.1 252 54.8
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 2.4e-64 250.0 193 64.2
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 2.2e-62 243.4 305 49.8
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 3.3e-58 229.6 210 61.9
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 2.8e-57 226.5 235 51.1
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.0e-55 220.3 274 44.2
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 5.9e-55 218.8 312 45.5
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.3e-54 217.6 278 45.3
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.6e-52 210.7 155 69.0
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 2.1e-52 210.3 168 65.5
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.8e-51 207.2 247 47.4
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.1e-50 204.5 159 65.4
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 2.3e-43 180.3 143 62.2
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 2.6e-42 176.8 250 41.2
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.0e-38 164.9 120 68.3
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 3.9e-35 152.9 202 43.1
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.4e-26 123.2 162 45.7
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.4e-19 101.3 79 60.8
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 5.9e-15 85.9 78 52.6


User provided reference genes

Program Settings