Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 0.0e+00 1404.8 769 100.0
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 1.8e-198 696.8 798 56.1
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 3.1e-185 652.9 796 54.4
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 8.1e-170 601.7 778 50.8
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 6.0e-165 585.5 812 49.1
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 8.6e-164 581.6 815 48.5
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 3.1e-161 573.2 789 50.1
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.4e-158 564.3 769 49.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 2.3e-156 557.0 799 51.3
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.1e-153 548.1 846 46.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 6.9e-153 545.4 777 48.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 6.4e-151 538.9 880 45.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 3.3e-147 526.6 800 46.5
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.9e-142 510.8 773 46.6
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.9e-139 500.7 631 51.7
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 3.7e-138 496.5 824 44.2
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 8.2e-138 495.4 776 46.8
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.1e-134 485.0 788 45.4
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.0e-132 476.9 779 45.3
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 2.5e-131 473.8 777 45.4
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.3e-131 473.4 783 45.1
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.3e-131 473.4 693 47.6
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 4.3e-131 473.0 779 45.3
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.4e-129 467.2 575 51.5
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 9.0e-129 465.3 780 44.4
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 2.5e-126 457.2 810 42.8
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.4e-124 451.4 852 42.5
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.8e-122 443.0 599 50.3
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 8.2e-122 442.2 830 43.6
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.4e-121 441.4 775 41.8
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.5e-120 438.0 886 40.1
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.3e-119 434.9 775 43.5
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 7.2e-118 429.1 777 42.3
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 2.7e-117 427.2 756 42.7
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 3.0e-116 423.7 730 44.7
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 5.1e-116 422.9 586 48.0
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.3e-115 420.2 818 40.2
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 3.7e-114 416.8 776 42.4
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 4.8e-114 416.4 777 42.6
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.1e-113 413.3 698 43.3
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 6.9e-113 412.5 780 42.3
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.0e-111 408.7 801 42.2
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 5.5e-110 402.9 772 43.7
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 7.2e-110 402.5 823 40.8
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 2.6e-107 394.0 832 39.4
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 4.4e-107 393.3 797 42.8
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 7.4e-107 392.5 808 42.2
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 9.7e-107 392.1 762 41.2
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.3e-106 391.7 808 39.7
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.2e-106 391.0 846 39.8
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.2e-106 391.0 841 39.7
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 4.8e-106 389.8 788 41.2
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 2.4e-105 387.5 790 40.9
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 3.1e-105 387.1 828 40.1
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 4.1e-105 386.7 795 41.0
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 9.1e-105 385.6 796 39.3
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 3.8e-103 380.2 770 40.3
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 3.2e-102 377.1 741 40.9
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.6e-101 374.8 834 39.2
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 2.7e-101 374.0 777 40.4
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 4.7e-101 373.2 770 41.7
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 5.2e-100 369.8 770 41.3
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 8.2e-98 362.5 626 41.5
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.1e-97 362.1 605 42.8
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 5.3e-97 359.8 575 45.7
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 7.0e-97 359.4 583 43.2
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 7.0e-97 359.4 779 38.5
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 5.5e-94 349.7 591 42.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.2e-93 348.6 786 41.0
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.6e-93 347.1 807 40.5
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.0e-92 345.5 696 39.4
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 7.0e-89 332.8 615 41.3
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.3e-87 328.6 626 40.6
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 6.6e-87 326.2 760 37.2
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 8.0e-85 319.3 293 62.8
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 2.4e-81 307.8 568 41.4
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.7e-80 304.3 726 38.2
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.7e-79 301.6 687 37.8
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.6e-77 295.0 550 40.2
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.6e-77 295.0 550 40.2
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 3.6e-77 293.9 836 34.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 1.7e-74 285.0 840 34.5
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 4.9e-74 283.5 858 33.6
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 9.2e-73 279.3 812 34.5
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 4.6e-72 276.9 623 39.0
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.0e-71 275.8 624 38.8
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 3.0e-71 274.2 845 33.7
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 2.8e-69 267.7 633 35.4
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 4.0e-68 263.8 699 34.0
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 6.4e-66 256.5 631 37.9
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 6.4e-66 256.5 631 37.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 7.0e-65 253.1 677 36.9
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 9.2e-65 252.7 788 33.2
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 3.9e-63 247.3 652 35.3
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 8.6e-63 246.1 719 33.4
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.1e-60 239.2 593 36.6
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.2e-59 235.7 596 35.9
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.5e-59 235.3 786 32.4
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 2.2e-58 231.5 763 32.6
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 1.6e-56 225.3 635 32.8
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 3.0e-55 221.1 794 31.4
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.2e-51 209.1 528 37.1
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.3e-50 205.7 726 32.1
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 7.1e-49 199.9 712 30.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.2e-43 182.6 589 32.1
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.4e-36 159.1 203 48.3
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 4.0e-28 131.0 414 34.1
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 4.0e-28 131.0 558 29.7
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 9.0e-28 129.8 598 29.3
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.6e-24 119.0 580 27.9
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.6e-24 119.0 580 27.9
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 7.9e-24 116.7 563 28.1
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.0e-15 89.7 152 40.8
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.8e-15 89.0 179 41.3
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.6e-08 65.9 219 32.0
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.0e-07 63.2 78 47.4


User provided reference genes

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