Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 0.0e+00 1357.4 671 100.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.7e-222 775.8 670 65.4
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.1e-150 537.0 704 50.6
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.8e-147 526.2 703 49.5
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 2.9e-139 500.0 707 47.7
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 5.4e-138 495.7 711 45.0
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 5.1e-136 489.2 698 48.0
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.3e-133 479.2 737 44.0
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 3.9e-128 463.0 699 44.9
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.5e-127 461.1 709 44.9
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 8.2e-126 455.3 682 44.4
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.0e-123 448.4 715 46.3
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.6e-121 441.0 707 45.1
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.0e-120 436.8 712 44.4
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 7.4e-119 432.2 712 43.1
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.2e-116 424.9 685 43.8
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 5.9e-116 422.5 716 42.3
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.7e-116 422.2 651 44.9
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.1e-109 401.7 705 40.9
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 6.9e-109 399.1 619 43.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 6.9e-109 399.1 681 42.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.2e-107 394.0 749 40.5
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 3.6e-105 386.7 677 42.2
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 9.4e-98 362.1 605 43.0
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 5.3e-93 346.3 704 39.2
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.9e-90 337.8 678 38.8
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 9.4e-90 335.5 735 38.1
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 6.3e-86 322.8 619 40.9
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.1e-85 320.1 711 37.3
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.6e-84 318.2 670 36.9
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-83 315.1 775 35.0
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.7e-83 314.7 482 44.6
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 5.0e-83 313.2 679 38.7
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.2e-82 309.3 746 36.9
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 8.0e-81 305.8 697 37.4
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 5.2e-80 303.1 686 37.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.4e-71 273.5 696 37.1
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 6.3e-70 269.6 678 35.4
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 9.2e-69 265.8 682 34.9
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.8e-65 254.2 582 36.6
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.5e-63 248.4 653 36.1
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 4.4e-63 246.9 665 34.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 5.4e-61 240.0 700 33.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.6e-60 238.4 699 31.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.7e-59 235.0 626 34.3
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 3.9e-59 233.8 626 33.7
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 3.9e-59 233.8 673 34.2
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 6.6e-59 233.0 625 33.6
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.5e-58 231.9 669 33.5
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.9e-58 231.5 696 30.5
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 3.3e-58 230.7 696 30.9
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 5.6e-58 229.9 678 33.9
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 9.5e-58 229.2 710 32.7
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 8.0e-57 226.1 636 32.5
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 5.2e-56 223.4 695 30.1
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.8e-56 223.0 432 38.4
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.2e-55 222.2 703 33.3
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 4.4e-55 220.3 703 33.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 5.8e-55 219.9 679 32.1
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 5.8e-55 219.9 672 33.3
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 9.8e-55 219.2 681 31.6
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.3e-54 218.8 656 33.2
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.7e-54 218.4 677 33.1
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.2e-54 218.0 669 33.3
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 2.9e-54 217.6 401 41.9
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.6e-52 211.8 672 31.4
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 6.0e-52 209.9 654 34.7
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 3.9e-51 207.2 695 30.2
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 3.9e-51 207.2 627 31.7
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.1e-48 199.1 664 30.3
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 4.0e-48 197.2 521 36.7
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 5.8e-47 193.4 617 33.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 4.9e-46 190.3 649 30.0
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.1e-45 189.1 694 31.4
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 7.1e-45 186.4 688 31.2
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.2e-44 185.7 676 30.5
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.9e-42 178.3 667 29.4
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 5.2e-40 170.2 620 30.5
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 5.8e-39 166.8 653 30.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 2.4e-37 161.4 196 50.5
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 3.2e-37 161.0 673 28.4
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.0e-35 154.5 664 29.2
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.5e-34 151.4 653 29.6
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.3e-34 150.6 654 27.8
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 5.6e-34 150.2 663 29.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.8e-33 147.9 613 29.2
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 8.1e-33 146.4 548 29.7
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.4e-32 144.8 670 28.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 4.0e-32 144.1 643 28.9
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 6.9e-32 143.3 625 27.5
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 3.8e-30 137.5 145 54.5
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 1.4e-29 135.6 678 27.3
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.4e-29 135.6 585 29.1
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.9e-29 135.2 629 27.2
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 5.4e-29 133.7 665 28.9
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.7e-28 131.3 224 43.3
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 4.6e-28 130.6 528 29.7
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-24 119.4 218 43.6
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 5.3e-24 117.1 262 37.0
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 2.6e-23 114.8 657 26.5
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 4.5e-23 114.0 666 27.2
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 4.9e-22 110.5 676 26.5
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.1e-21 109.4 670 25.7
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.2e-20 105.9 262 34.4
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 2.7e-20 104.8 670 25.1
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 1.3e-19 102.4 671 25.5
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 5.1e-19 100.5 670 25.8
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 2.1e-17 95.1 98 55.1
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 6.2e-17 93.6 674 26.1
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 4.0e-16 90.9 666 25.7
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 2.5e-13 81.6 417 27.6
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.5e-13 81.6 627 26.0
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 4.2e-13 80.9 532 25.4
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 3.0e-11 74.7 166 37.3
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 6.7e-11 73.6 533 25.5
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 1.1e-08 66.2 332 27.1
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.0e-07 62.0 96 42.7
SMO118G0078 Selaginella moellendorffii HOM05D011959 ORTHO05D013711 1.0e-06 59.7 136 33.1
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 3.8e-06 57.8 99 47.5


User provided reference genes

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