Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 1.1e-173 613.2 317 100.0
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 6.2e-76 288.5 341 57.2
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.7e-28 131.0 319 37.0
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.3e-25 121.3 311 36.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 5.5e-24 115.9 346 35.0
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.2e-23 114.8 351 32.5
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.7e-20 104.4 318 31.8
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 3.7e-20 103.2 315 32.7
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 9.2e-19 98.6 217 38.2
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 9.2e-19 98.6 337 32.9
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.3e-17 94.7 311 31.2
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 2.9e-17 93.6 312 31.4
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.0e-17 92.8 304 31.2
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 6.6e-17 92.4 350 32.9
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 9.5e-16 88.6 313 29.4
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.2e-15 88.2 328 32.3
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.7e-15 86.3 324 31.5
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.0e-14 85.1 323 31.6
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.4e-14 84.7 307 32.6
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.8e-14 84.3 315 31.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.3e-14 84.0 306 34.0
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.6e-13 80.5 303 31.4
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 3.4e-13 80.1 330 29.7
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 3.4e-13 80.1 203 35.5
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 5.7e-13 79.3 314 30.9
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.2e-12 77.4 303 31.0
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-12 77.4 298 29.5
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 4.9e-12 76.3 302 31.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 6.4e-12 75.9 316 31.3
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 1.4e-11 74.7 331 30.5
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.4e-11 73.9 335 28.4
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 3.2e-11 73.6 334 26.3
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 5.4e-11 72.8 328 29.0
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 9.2e-11 72.0 334 26.0
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.2e-11 72.0 295 31.2
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 9.2e-11 72.0 170 37.1
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.2e-10 71.6 170 37.1
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 1.6e-10 71.2 324 30.2
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.7e-10 70.5 217 33.6
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 3.5e-10 70.1 324 30.9
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 4.6e-10 69.7 323 31.3
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 5.9e-10 69.3 301 27.6
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 5.9e-10 69.3 309 32.4
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 7.8e-10 68.9 311 28.0
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.3e-09 68.2 305 28.9
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 1.3e-09 68.2 305 27.5
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.7e-09 67.8 332 28.0
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 1.7e-09 67.8 315 26.0
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 6.6e-09 65.9 318 27.7
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 4.3e-08 63.2 333 27.6
Ca_13429_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 7.3e-08 62.4 304 28.0
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 9.5e-08 62.0 161 34.8
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 9.5e-08 62.0 144 34.0
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 1.2e-07 61.6 309 24.9
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 1.6e-07 61.2 233 29.2
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 3.6e-07 60.1 209 31.6
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 3.6e-07 60.1 293 28.0
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 3.6e-07 60.1 323 30.3
Lalb_Chr22g0354321 Lupinus albus HOM05D007760 ORTHO05D008337 6.2e-07 59.3 343 27.7
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 6.2e-07 59.3 301 29.9
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 6.2e-07 59.3 330 26.7
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 8.0e-07 58.9 158 31.6
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 8.0e-07 58.9 136 32.4
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.8e-06 57.8 296 28.0
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 4.0e-06 56.6 186 30.6
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 5.2e-06 56.2 295 27.8


User provided reference genes

Program Settings