Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.1e-63 245.0 125 100.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 2.0e-38 162.5 94 86.2
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 7.7e-38 160.6 97 82.5
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.3e-37 159.1 124 66.1
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.0e-37 157.9 94 79.8
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 5.0e-37 157.9 110 73.6
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 5.0e-37 157.9 94 83.0
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 6.5e-37 157.5 94 79.8
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 6.5e-37 157.5 94 80.9
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.1e-36 156.8 94 78.7
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 3.3e-36 155.2 97 77.3
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 9.5e-36 153.7 97 78.4
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.8e-35 152.1 97 77.3
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.8e-35 152.1 97 77.3
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.6e-35 151.8 95 78.9
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 8.0e-35 150.6 97 76.3
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.8e-34 149.4 95 80.0
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.8e-34 149.4 94 76.6
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 6.8e-34 147.5 97 74.2
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 2.2e-32 142.5 94 73.4
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 2.2e-32 142.5 107 70.1
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.3e-32 141.0 94 74.5
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.3e-32 141.0 94 74.5
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 8.3e-32 140.6 99 71.7
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 1.4e-31 139.8 96 70.8
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.8e-31 139.4 94 73.4
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.8e-31 139.4 94 73.4
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.1e-31 138.7 99 70.7
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.1e-31 138.7 99 70.7
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 4.1e-31 138.3 94 71.3
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.6e-30 136.3 95 72.6
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 1.6e-30 136.3 94 71.3
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.0e-30 136.0 94 72.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 2.0e-30 136.0 94 72.3
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 2.7e-30 135.6 94 68.1
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.7e-29 132.9 95 72.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.7e-29 132.9 94 67.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.3e-29 132.5 94 68.1
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 2.3e-29 132.5 95 70.5
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 2.3e-29 132.5 101 67.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.9e-29 132.1 98 69.4
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.8e-29 131.7 95 71.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 5.0e-29 131.3 95 70.5
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 5.0e-29 131.3 106 66.0
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.1e-28 130.2 99 68.7
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.5e-28 129.8 95 70.5
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.5e-28 129.0 101 65.3
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 3.3e-28 128.6 104 60.6
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.3e-28 128.3 95 68.4
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 7.3e-28 127.5 100 66.0
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.2e-27 126.7 94 67.0
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.2e-27 126.7 111 62.2
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.6e-27 126.3 98 69.4
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.6e-27 126.3 95 64.2
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 2.1e-27 125.9 94 64.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.1e-27 125.9 103 64.1
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.6e-27 125.2 109 62.4
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.7e-27 124.8 110 58.2
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.0e-26 123.6 107 62.6
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.4e-26 123.2 105 61.9
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 2.3e-26 122.5 120 56.7
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.3e-26 122.5 96 62.5
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.3e-26 122.5 94 61.7
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 3.0e-26 122.1 120 56.7
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 3.0e-26 122.1 95 63.2
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.0e-26 122.1 105 61.0
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 5.2e-26 121.3 97 60.8
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 6.8e-26 120.9 97 61.9
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 8.9e-26 120.6 105 60.0
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.2e-25 120.2 96 60.4
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 2.0e-25 119.4 117 55.6
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.0e-25 119.4 99 60.6
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 2.6e-25 119.0 94 64.9
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 3.4e-25 118.6 118 55.9
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 3.4e-25 118.6 106 60.4
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.4e-25 118.2 101 60.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 4.4e-25 118.2 120 55.0
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 5.8e-25 117.9 120 54.2
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 5.8e-25 117.9 120 54.2
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 5.8e-25 117.9 120 54.2
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.8e-25 117.9 94 62.8
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 7.5e-25 117.5 108 59.3
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 9.8e-25 117.1 123 53.7
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 9.8e-25 117.1 98 62.2
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.3e-24 116.7 94 59.6
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.3e-24 116.7 96 64.6
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.3e-24 116.7 124 51.6
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.2e-24 115.9 104 57.7
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-24 115.5 99 59.6
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 3.7e-24 115.2 95 61.1
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 3.7e-24 115.2 121 54.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 3.7e-24 115.2 97 58.8
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.7e-24 115.2 94 60.6
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.9e-24 114.8 94 58.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.9e-24 114.8 99 61.6
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 8.3e-24 114.0 120 54.2
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 1.1e-23 113.6 97 59.8
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 3.2e-23 112.1 95 61.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.1e-23 111.7 99 54.5
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 5.4e-23 111.3 97 57.7
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 2.7e-22 109.0 118 50.8
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.7e-22 109.0 118 51.7
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.7e-22 109.0 100 56.0
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.7e-22 109.0 95 60.0
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 4.6e-22 108.2 118 53.4
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 6.0e-22 107.8 94 55.3
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 7.8e-22 107.5 103 54.4
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 3.9e-21 105.1 98 54.1
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.1e-20 103.6 109 52.3
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 4.3e-20 101.7 120 50.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 4.3e-20 101.7 120 50.8
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 4.3e-20 101.7 87 54.0
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 7.3e-20 100.9 107 52.3
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 1.6e-19 99.8 108 53.7
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 2.8e-19 99.0 84 58.3
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 8.0e-19 97.4 105 50.5
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.1e-18 97.1 108 50.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.3e-18 95.9 106 49.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 6.8e-18 94.4 103 48.5
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 8.9e-18 94.0 94 51.1
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.0e-17 92.8 108 49.1
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.0e-17 92.8 79 55.7
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 5.4e-15 84.7 104 44.2
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 5.4e-15 84.7 109 43.1
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.6e-14 83.2 68 64.7
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.0e-13 80.5 101 45.5
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 6.2e-11 71.2 68 55.9
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 8.3e-08 60.8 56 53.6
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.6e-06 56.6 55 52.7


User provided reference genes

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