Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.4e-63 246.1 128 100.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 9.1e-18 94.0 114 48.2
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.5e-15 86.7 114 43.9
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 9.4e-15 84.0 108 42.6
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 9.4e-15 84.0 108 44.4
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.6e-14 83.2 114 43.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 3.6e-14 82.0 110 44.5
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.8e-13 79.7 94 47.9
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.8e-13 79.7 112 44.6
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 5.2e-13 78.2 115 43.5
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 1.2e-12 77.0 92 44.6
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.5e-12 76.6 108 42.6
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-12 75.9 118 41.5
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 4.4e-12 75.1 106 40.6
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 5.7e-12 74.7 116 42.2
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 7.5e-12 74.3 112 43.8
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 7.5e-12 74.3 115 39.1
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 7.5e-12 74.3 109 45.0
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-11 73.6 106 38.7
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.3e-11 71.2 109 38.5
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-10 70.5 106 38.7
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-10 70.5 108 40.7
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-10 70.5 122 37.7
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.4e-10 70.1 110 36.4
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 2.4e-10 69.3 110 40.0
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 5.4e-10 68.2 110 40.0
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 7.0e-10 67.8 111 35.1
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 9.1e-10 67.4 112 42.0
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 1.2e-09 67.0 111 36.9
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 1.6e-09 66.6 112 43.8
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 3.5e-09 65.5 104 39.4
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 3.5e-09 65.5 105 41.0
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.9e-09 64.7 108 38.9
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 5.9e-09 64.7 108 41.7
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 5.9e-09 64.7 109 41.3
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 5.9e-09 64.7 109 41.3
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 7.7e-09 64.3 112 42.9
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-08 63.9 127 36.2
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.3e-08 63.5 109 40.4
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 1.3e-08 63.5 101 40.6
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.3e-08 63.5 109 35.8
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.7e-08 63.2 112 33.0
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.2e-08 62.8 117 38.5
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 2.9e-08 62.4 108 37.0
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 2.9e-08 62.4 116 41.4
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 3.8e-08 62.0 95 45.3
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.0e-08 61.6 107 39.3
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 6.5e-08 61.2 110 34.5
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 6.5e-08 61.2 110 34.5
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 8.5e-08 60.8 127 34.6
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 1.1e-07 60.5 127 33.9
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-07 60.5 94 38.3
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.1e-07 60.5 118 34.7
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 1.1e-07 60.5 118 33.9
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.5e-07 60.1 109 35.8
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.5e-07 60.1 111 36.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.5e-07 60.1 110 37.3
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.5e-07 60.1 123 35.0
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 2.5e-07 59.3 102 34.3
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.5e-07 59.3 117 34.2
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 3.2e-07 58.9 110 34.5
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 4.2e-07 58.5 116 36.2
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 4.2e-07 58.5 127 33.9
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.5e-07 58.2 123 34.1
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.5e-07 58.2 90 36.7
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 5.5e-07 58.2 118 33.9
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 5.5e-07 58.2 111 36.0
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 7.2e-07 57.8 108 34.3
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.4e-07 57.4 127 33.1
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.2e-06 57.0 129 32.6
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 1.2e-06 57.0 112 33.0
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.2e-06 57.0 111 36.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.6e-06 56.6 106 34.0
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-06 56.6 101 36.6
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.1e-06 56.2 93 39.8
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 2.1e-06 56.2 111 32.4
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 2.7e-06 55.8 111 34.2
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-06 55.8 111 34.2
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 2.7e-06 55.8 126 30.2
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 2.7e-06 55.8 108 35.2
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 2.7e-06 55.8 111 32.4
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 3.6e-06 55.5 121 32.2
Gohir.A09G091466 Gossypium hirsutum HOM05D010298 ORTHO05D012539 4.7e-06 55.1 112 29.5
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 4.7e-06 55.1 106 34.0
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 6.1e-06 54.7 104 37.5
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 6.1e-06 54.7 105 36.2
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 8.0e-06 54.3 86 38.4


User provided reference genes

Program Settings