Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G110301 Manihot esculenta HOM05D003787 ORTHO05D001736 3.3e-289 998.0 664 100.0
Manes.01G027300 Manihot esculenta HOM05D003787 ORTHO05D001736 1.8e-37 161.8 286 42.3
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 3.2e-13 81.3 301 30.9
TWI75G0087 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 3.2e-13 81.3 167 40.1
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 4.1e-13 80.9 344 31.4
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 4.6e-12 77.4 308 34.4
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 2.3e-11 75.1 315 32.1
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 5.1e-11 73.9 221 32.6
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 5.1e-11 73.9 333 30.9
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 6.6e-11 73.6 351 30.2
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 8.6e-11 73.2 260 31.9
TWI31G1463 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 1.5e-10 72.4 279 31.5
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 1.9e-10 72.0 287 31.7
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 2.5e-10 71.6 283 33.9
Actinidia17586 Actinidia chinensis HOM05D003787 ORTHO05D001736 3.3e-10 71.2 176 38.6
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 3.3e-10 71.2 229 38.0
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 4.3e-10 70.9 179 36.3
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 5.6e-10 70.5 301 30.2
CANSAT64G2286 Cannabis sativa HOM05D003787 ORTHO05D001736 2.1e-09 68.6 210 34.8
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 4.7e-09 67.4 179 38.5
Gohir.A13G082800 Gossypium hirsutum HOM05D003787 ORTHO05D001736 8.1e-09 66.6 202 35.1
SHI15724 Sapria himalayana HOM05D003787 ORTHO05D001736 1.1e-08 66.2 218 30.7
Gohir.D12G164300 Gossypium hirsutum HOM05D039012 ORTHO05D001736 1.4e-08 65.9 363 28.7
Gorai.008G176900 Gossypium raimondii HOM05D039012 ORTHO05D001736 1.4e-08 65.9 363 28.9
Lalb_Chr04g0255641 Lupinus albus HOM05D014318 ORTHO05D001736 1.4e-08 65.9 332 33.4
Lalb_Chr17g0341211 Lupinus albus HOM05D014318 ORTHO05D001736 1.8e-08 65.5 333 30.6
Ca_04304_v3 Cicer arietinum L. HOM05D003787 ORTHO05D001736 3.1e-08 64.7 63 55.6
Gohir.D13G082500 Gossypium hirsutum HOM05D003787 ORTHO05D001736 4.0e-08 64.3 202 34.7
Dinv33830 Davidia involucrata HOM05D003787 ORTHO05D001736 8.9e-08 63.2 169 36.7
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 8.9e-08 63.2 147 34.0
Atru.chr8.428 Acer truncatum HOM05D003787 ORTHO05D001736 1.2e-07 62.8 198 31.3
PGSC0003DMG400001359 Solanum tuberosum HOM05D003787 ORTHO05D001736 1.2e-07 62.8 79 48.1
Gohir.A12G161000 Gossypium hirsutum HOM05D039012 ORTHO05D001736 2.6e-07 61.6 358 27.9
Gorai.013G094300 Gossypium raimondii HOM05D003787 ORTHO05D001736 3.4e-07 61.2 202 34.2
Glyma.01G060001 Glycine max HOM05D014318 ORTHO05D001736 4.4e-07 60.8 271 29.2
Medtr6g015240 Medicago truncatula HOM05D003787 ORTHO05D001736 4.4e-07 60.8 135 36.3
Rhsim10G0049700 Rhododendron simsii HOM05D003787 ORTHO05D001736 5.8e-07 60.5 199 33.2
COL.COLO4_27878 Corchorus olitorius HOM05D003787 ORTHO05D001736 7.6e-07 60.1 233 31.3
Psat2g130920 Pisum sativum HOM05D014318 ORTHO05D001736 7.6e-07 60.1 236 36.4
THA.LOC104800368 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 7.6e-07 60.1 60 53.3
THA.LOC104805198 Tarenaya hassleriana HOM05D003787 ORTHO05D001736 7.6e-07 60.1 51 56.9
VMungo1215G1514 Vigna mungo HOM05D014318 ORTHO05D001736 7.6e-07 60.1 167 33.5
AL5G13410 Arabidopsis lyrata HOM05D006637 ORTHO05D001736 2.2e-06 58.5 53 54.7
THA.LOC104801821 Tarenaya hassleriana HOM05D003787 ORTHO05D001736 2.2e-06 58.5 50 58.0
Cfa007670 Carpinus fangiana HOM05D003787 ORTHO05D001736 2.9e-06 58.2 193 31.6
Atru.chr11.1622 Acer truncatum HOM05D003787 ORTHO05D001736 3.8e-06 57.8 304 29.9
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 3.8e-06 57.8 280 29.6
Migut.H00622 Erythranthe guttata HOM05D003787 ORTHO05D001736 3.8e-06 57.8 202 29.7
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 3.8e-06 57.8 197 32.5
MD09G1067000 Malus domestica HOM05D003787 ORTHO05D001736 4.9e-06 57.4 60 53.3
TPR.G24475 Trifolium pratense HOM05D003787 ORTHO05D000653 4.9e-06 57.4 114 38.6
Migut.K01274 Erythranthe guttata HOM05D003787 ORTHO05D001736 6.4e-06 57.0 69 46.4
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 6.4e-06 57.0 287 32.1
Solyc02g088840.3 Solanum lycopersicum HOM05D003787 ORTHO05D001736 6.4e-06 57.0 79 44.3
CDE04G2454 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 8.4e-06 56.6 92 43.5
Lalb_Chr10g0098891 Lupinus albus HOM05D014318 ORTHO05D001736 8.4e-06 56.6 277 32.1


User provided reference genes

Program Settings