Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.7e-293 1010.7 487 100.0
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 1.7e-189 666.4 494 68.4
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.4e-188 663.3 488 67.8
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 2.9e-181 639.0 485 65.8
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 7.9e-179 630.9 475 65.9
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.8e-178 629.8 473 66.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 4.3e-177 625.2 482 64.1
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.5e-174 616.7 481 64.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.6e-174 615.9 478 64.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 3.8e-173 612.1 481 63.8
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.9e-172 609.8 506 62.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 6.0e-171 604.7 473 63.2
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.0e-170 602.4 487 63.2
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 3.9e-170 602.1 488 61.7
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.3e-169 598.6 443 67.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.1e-167 594.0 494 60.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.4e-166 589.0 490 61.6
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 5.0e-165 585.1 497 59.8
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 6.5e-165 584.7 466 60.9
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.1e-164 583.9 498 59.8
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.9e-164 583.2 474 61.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.9e-164 583.2 490 60.8
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 7.2e-164 581.3 429 66.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 5.7e-161 571.6 488 60.9
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 5.7e-161 571.6 504 57.5
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 7.4e-161 571.2 443 63.2
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.7e-161 570.9 480 59.2
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.2e-160 567.8 483 58.8
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.2e-160 567.8 483 58.8
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-159 567.0 475 59.2
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.8e-159 566.6 475 59.4
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.8e-159 566.6 479 60.3
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.1e-159 565.8 495 58.0
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 5.3e-159 565.1 477 59.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 5.3e-159 565.1 474 59.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 4.5e-158 562.0 492 57.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 5.0e-157 558.5 464 59.7
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 6.5e-157 558.1 486 57.2
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 6.5e-157 558.1 370 67.6
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 7.9e-155 551.2 463 59.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.4e-154 550.4 468 59.0
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 8.8e-154 547.7 483 56.3
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-153 547.4 404 65.8
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 1.7e-152 543.5 428 63.8
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 3.7e-152 542.3 495 56.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.1e-151 539.3 432 61.1
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 5.3e-151 538.5 426 62.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 9.1e-151 537.7 365 68.5
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.5e-150 537.0 494 57.3
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.2e-149 533.1 493 55.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.2e-149 533.1 431 62.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 6.5e-149 531.6 493 55.4
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.4e-148 530.4 432 61.8
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.2e-147 527.3 431 60.1
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 6.1e-147 525.0 452 58.8
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 3.9e-146 522.3 458 58.3
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 8.8e-146 521.2 428 61.0
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 8.8e-146 521.2 461 57.0
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 5.7e-145 518.5 426 58.7
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.8e-144 516.2 499 53.1
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 8.2e-144 514.6 372 65.1
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 8.2e-144 514.6 509 54.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 9.1e-143 511.1 429 57.1
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 5.9e-142 508.4 434 57.8
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 2.2e-141 506.5 436 58.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 2.2e-141 506.5 471 54.6
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 2.9e-141 506.1 485 56.5
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 8.5e-141 504.6 430 58.4
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-140 504.2 485 56.3
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.9e-140 503.4 391 61.9
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.9e-140 503.4 461 56.4
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.2e-140 502.7 436 58.0
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.4e-140 501.1 432 58.3
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-139 500.7 460 57.0
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 3.6e-139 499.2 392 62.0
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.7e-139 498.8 460 56.5
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.7e-139 498.8 492 51.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 6.1e-139 498.4 383 62.1
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.0e-138 497.7 435 56.6
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.0e-138 497.7 488 54.9
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 5.2e-138 495.4 401 59.9
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.2e-138 495.4 460 56.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.0e-137 493.4 405 60.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.0e-137 493.4 405 60.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.0e-137 493.4 405 60.2
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.7e-137 491.9 510 52.7
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 9.7e-137 491.1 434 56.9
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.2e-136 490.0 429 57.8
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.2e-136 490.0 492 53.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.1e-135 487.6 477 55.6
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.4e-135 487.3 429 57.8
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 3.5e-134 482.6 431 56.6
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.2e-133 479.9 405 60.0
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.2e-133 479.9 359 66.0
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.3e-130 469.9 433 55.4
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.7e-128 462.6 417 55.6
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.1e-127 458.0 371 58.5
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.2e-122 442.2 421 52.7
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.5e-108 394.8 426 46.5
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-98 364.8 472 44.3
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.6e-97 360.1 323 58.2
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.6e-83 314.3 396 44.2
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.8e-83 313.5 497 39.8
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.7e-83 312.8 258 60.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 9.9e-81 305.1 265 59.6
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 4.6e-78 296.2 357 45.4
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 6.0e-78 295.8 207 64.3
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 8.1e-67 258.8 428 37.4
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 3.7e-59 233.4 400 37.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 9.0e-58 228.8 313 40.9
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 8.2e-51 205.7 223 52.5
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.7e-35 154.8 188 46.8
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.7e-33 146.0 128 59.4
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.0e-32 145.6 421 30.9
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 3.8e-32 143.7 111 63.1
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.5e-31 141.0 389 29.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.1e-28 132.1 413 29.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.2e-24 117.9 335 32.2
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 4.7e-22 110.2 53 88.7
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.2e-19 101.3 227 34.8


User provided reference genes

Program Settings