Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.2e-88 330.1 195 100.0
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.1e-62 243.8 199 79.9
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.3e-60 236.9 197 75.6
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 2.3e-60 236.1 197 67.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.5e-59 232.6 197 65.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 9.5e-59 230.7 198 63.6
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.2e-58 230.3 197 65.5
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.1e-58 229.6 195 65.1
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 3.6e-58 228.8 197 74.1
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 6.2e-58 228.0 202 67.8
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.3e-57 226.1 198 74.2
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.3e-57 226.1 203 65.0
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.5e-56 223.4 190 75.3
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 2.2e-55 219.5 197 69.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 2.2e-55 219.5 197 64.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 2.9e-55 219.2 196 64.3
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.7e-55 218.8 196 59.2
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 5.4e-54 214.9 210 63.8
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.7e-53 212.6 203 61.6
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 3.5e-53 212.2 196 62.2
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 4.6e-53 211.8 196 60.7
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 4.6e-53 211.8 203 60.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.6e-53 211.8 197 62.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 6.0e-53 211.5 200 69.5
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.0e-53 211.5 203 59.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 7.8e-53 211.1 196 65.8
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.7e-52 209.9 196 60.7
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.7e-52 209.9 196 62.2
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 1.7e-52 209.9 200 71.5
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.3e-52 209.5 195 61.0
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.9e-52 208.8 201 70.6
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 5.0e-52 208.4 197 61.4
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 5.0e-52 208.4 199 62.3
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 5.6e-51 204.9 147 72.8
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 9.5e-51 204.1 197 58.9
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.6e-50 203.4 196 60.2
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 2.8e-50 202.6 207 60.4
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.1e-49 200.7 204 60.3
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 2.3e-49 199.5 206 57.3
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.0e-49 198.7 196 58.2
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.2e-48 197.2 204 59.3
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 2.6e-48 196.1 225 50.7
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.4e-48 195.7 195 59.5
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.3e-47 193.7 206 55.8
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 3.7e-47 192.2 198 55.6
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 6.4e-47 191.4 195 57.9
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.9e-46 189.9 206 55.8
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 2.4e-46 189.5 146 67.8
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 4.1e-46 188.7 208 54.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 9.2e-46 187.6 197 57.4
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.2e-45 187.2 203 59.1
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.5e-45 185.7 204 53.9
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 6.0e-45 184.9 216 55.1
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 6.0e-45 184.9 196 64.3
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 7.8e-45 184.5 207 53.1
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 7.8e-45 184.5 199 55.3
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.3e-44 183.7 206 62.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.7e-44 183.3 206 53.9
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 2.3e-44 183.0 204 53.4
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 2.3e-44 183.0 204 53.4
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 3.0e-44 182.6 216 53.2
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 3.0e-44 182.6 191 58.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 3.0e-44 182.6 200 56.5
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 5.1e-44 181.8 188 60.6
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 5.1e-44 181.8 203 55.7
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 2.5e-43 179.5 221 49.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 3.3e-43 179.1 206 57.3
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.8e-42 176.0 149 62.4
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 1.4e-41 173.7 204 53.9
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.8e-41 173.3 204 54.4
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 3.1e-41 172.6 208 58.7
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 3.1e-41 172.6 206 48.1
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 3.1e-41 172.6 206 48.1
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.8e-41 171.4 226 45.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.5e-40 170.2 206 48.1
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.6e-40 169.5 212 47.6
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 5.8e-40 168.3 213 51.2
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.7e-39 166.8 200 54.0
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.9e-38 163.3 200 54.0
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.4e-38 162.9 160 56.9
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.2e-37 160.6 214 44.9
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 2.1e-37 159.8 223 50.7
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 6.0e-37 158.3 216 46.3
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 2.3e-36 156.4 251 44.2
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.0e-36 156.0 226 51.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 7.3e-35 151.4 200 58.5
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 3.6e-34 149.1 205 46.8
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 6.2e-34 148.3 194 46.4
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 7.6e-32 141.4 211 45.0
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 8.4e-31 137.9 208 43.8
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.4e-30 137.1 146 50.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.0e-28 129.4 121 71.9
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 5.1e-28 128.6 197 43.7
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 5.6e-27 125.2 212 51.4
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.4e-25 120.6 149 48.3
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.8e-25 120.2 129 66.7
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 3.1e-25 119.4 127 57.5
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 2.6e-24 116.3 197 37.1
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.2e-23 113.2 114 56.1
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.3e-20 104.0 125 51.2
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 6.9e-17 91.7 93 57.0
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.1e-13 80.1 83 55.4
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.8e-12 77.0 87 51.7


User provided reference genes

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