Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G086320 Manihot esculenta HOM05D013164 ORTHO05D013587 9.5e-116 420.2 220 100.0
Manes.07G091751 Manihot esculenta HOM05D013164 ORTHO05D013587 9.5e-116 420.2 220 100.0
Manes.S022953 Manihot esculenta HOM05D013164 ORTHO05D013587 9.5e-116 420.2 220 100.0
Manes.S032016 Manihot esculenta HOM05D013164 ORTHO05D013587 3.0e-109 398.7 220 96.4
Manes.14G173833 Manihot esculenta HOM05D013164 ORTHO05D013587 1.3e-101 373.2 195 100.0
Manes.15G169350 Manihot esculenta HOM05D013164 ORTHO05D013587 3.4e-89 332.0 196 90.8
Manes.18G143724 Manihot esculenta HOM05D013164 ORTHO05D013587 1.8e-21 107.1 158 46.2
Manes.01G056850 Manihot esculenta HOM05D013164 ORTHO05D013587 3.2e-18 96.3 140 42.9
Manes.S023053 Manihot esculenta HOM05D024245 ORTHO05D013587 1.1e-15 87.8 143 41.3
Manes.06G063050 Manihot esculenta HOM05D013164 ORTHO05D013587 2.1e-14 83.6 129 38.8
Manes.08G086133 Manihot esculenta HOM05D024245 ORTHO05D013587 2.1e-14 83.6 107 42.1
Sopen07g005880 Solanum pennellii HOM05D000004 ORTHO05D003926 6.6e-08 62.0 39 64.1
SHI49393 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-07 61.2 60 51.7
Sopen01g027520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 60.5 45 51.1
SHI45768 Sapria himalayana HOM05D000004 ORTHO05D000002 2.5e-07 60.1 60 50.0
Sopen08g006680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 59.7 51 49.0
PGSC0003DMG400037751 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.3e-07 59.7 40 62.5
PGSC0003DMG400040814 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.3e-07 59.3 39 59.0
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.3e-07 58.5 81 39.5
Sopen03g037420 Solanum pennellii HOM05D000004 ORTHO05D000034 9.5e-07 58.2 44 50.0
Sopen12g015720 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-07 58.2 44 50.0
Sopen09g022690 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 57.8 38 57.9
PGSC0003DMG400035219 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.2e-06 57.8 39 56.4
SHI25940 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 57.4 65 47.7
Sopen03g026420 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-06 57.4 73 42.5
Sopen08g006160 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 57.4 44 50.0
MELO3C034471.2 Cucumis melo HOM05D007786 ORTHO05D009980 2.1e-06 57.0 71 39.4
Sopen03g020990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.0 38 57.9
Sopen07g009920 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 57.0 44 50.0
Sopen11g023810 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-06 57.0 59 47.5
PGSC0003DMG400044844 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.1e-06 57.0 36 58.3
PGSC0003DMG400046383 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.1e-06 57.0 39 56.4
arahy.Tifrunner.gnm1.ann1.8BX9LS Arachis hypogaea HOM05D000004 ORTHO05D000002 2.8e-06 56.6 97 33.0
Sopen05g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.6 38 57.9
Sopen08g010440 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 56.6 33 63.6
THA.LOC109116282 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.8e-06 56.6 61 52.5
Haze_01590 Corylus avellana HOM05D063246 ORTHO05D013587 3.6e-06 56.2 89 38.2
Sopen10g009240 Solanum pennellii HOM05D000004 ORTHO05D003926 3.6e-06 56.2 39 53.8
Sopen10g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 56.2 54 46.3
arahy.Tifrunner.gnm1.ann1.SV62YW Arachis hypogaea HOM05D000004 ORTHO05D000002 4.7e-06 55.8 90 36.7
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.7e-06 55.8 35 60.0
Sopen02g039160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 50.0
Sopen04g034490 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 50.0
Sopen06g025450 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 50.0
Sopen09g023670 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 70 41.4
Sopen09g031770 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 50.0
Sopen10g008060 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 50.0
Sopen12g028350 Solanum pennellii HOM05D000004 ORTHO05D000034 4.7e-06 55.8 73 42.5
PGSC0003DMG400037849 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.7e-06 55.8 46 56.5
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.2e-06 55.5 80 40.0
ECA233G0515 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-06 55.5 60 48.3
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.2e-06 55.5 42 57.1
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 6.2e-06 55.5 42 57.1
Sopen07g011410 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 55.5 62 40.3
Sopen09g025940 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 55.5 84 39.3
Sopen10g015100 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-06 55.5 51 47.1
Thecc.07G165400 Theobroma cacao HOM05D010356 ORTHO05D013587 6.2e-06 55.5 47 57.4
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 8.1e-06 55.1 78 41.0
Oeu004346.1 Olea europaea HOM05D000004 ORTHO05D000002 8.1e-06 55.1 81 32.1
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 8.1e-06 55.1 88 36.4
Sopen06g006090 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-06 55.1 128 33.6
Sopen06g006510 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-06 55.1 80 38.8
Sopen09g013240 Solanum pennellii HOM05D000004 ORTHO05D000034 8.1e-06 55.1 62 40.3
Sopen10g013550 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-06 55.1 70 35.7
Sopen11g008000 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-06 55.1 84 40.5


User provided reference genes

Program Settings