Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.5e-90 335.5 178 100.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 5.6e-50 201.4 178 63.5
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 7.4e-50 201.1 178 64.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 9.6e-50 200.7 178 63.5
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.7e-49 198.7 180 62.8
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 1.5e-47 193.4 186 61.8
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.5e-47 193.4 182 62.6
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 4.5e-47 191.8 178 62.4
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 9.9e-47 190.7 179 63.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.3e-46 190.3 180 62.2
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 2.2e-46 189.5 178 62.4
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.4e-45 186.8 184 62.0
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.4e-45 186.8 184 59.8
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.4e-45 186.0 181 59.1
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 5.5e-45 184.9 187 57.8
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 5.5e-45 184.9 180 61.1
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 5.5e-45 184.9 180 62.2
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 7.1e-45 184.5 180 59.4
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.1e-44 183.0 184 57.1
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 2.1e-44 183.0 181 58.6
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 3.5e-44 182.2 179 59.2
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 6.0e-44 181.4 180 58.9
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 6.0e-44 181.4 185 58.4
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 7.9e-44 181.0 180 60.0
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 7.9e-44 181.0 181 59.1
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 1.3e-43 180.3 181 60.8
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 5.1e-43 178.3 184 56.5
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 5.1e-43 178.3 181 59.1
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 6.7e-43 177.9 180 59.4
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.1e-42 177.2 189 56.1
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 1.9e-42 176.4 180 57.2
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.9e-42 176.4 175 58.3
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.5e-42 176.0 179 60.3
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 3.3e-42 175.6 126 72.2
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 4.3e-42 175.3 179 56.4
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.6e-42 174.9 178 57.9
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.3e-41 173.7 176 58.0
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.3e-41 173.7 179 59.2
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.6e-41 173.3 184 55.4
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.1e-41 172.9 178 59.0
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 3.7e-41 172.2 180 56.1
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.4e-40 170.2 178 57.3
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.8e-40 169.9 185 54.1
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 5.3e-40 168.3 190 56.3
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 9.0e-40 167.5 176 56.8
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.5e-39 166.8 188 53.2
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.6e-39 166.0 179 55.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 4.5e-39 165.2 176 55.7
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 7.6e-39 164.5 129 65.9
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.3e-38 163.7 178 55.6
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 4.9e-38 161.8 130 68.5
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 5.5e-37 158.3 181 55.8
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 9.3e-37 157.5 108 74.1
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 6.0e-36 154.8 179 53.1
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 5.7e-34 148.3 139 58.3
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 9.7e-34 147.5 184 50.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.8e-33 146.0 119 61.3
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.2e-33 144.4 123 61.0
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.4e-32 142.9 193 47.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 5.3e-32 141.7 120 61.7
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 9.0e-32 141.0 181 52.5
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 9.0e-32 141.0 182 48.9
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 3.4e-31 139.0 119 58.0
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.4e-31 139.0 120 60.8
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 1.0e-30 137.5 119 58.0
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 1.0e-30 137.5 119 58.0
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.0e-30 137.5 120 63.3
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.3e-30 137.1 185 47.0
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.3e-30 137.1 141 53.2
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 2.2e-30 136.3 117 56.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.9e-30 136.0 136 57.4
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 3.8e-30 135.6 138 52.9
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.8e-30 135.6 169 54.4
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 5.0e-30 135.2 181 48.6
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 5.0e-30 135.2 182 48.9
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 6.5e-30 134.8 144 52.1
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 6.5e-30 134.8 144 52.1
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 6.5e-30 134.8 144 52.1
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 6.5e-30 134.8 145 54.5
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 4.2e-29 132.1 188 46.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 9.3e-29 131.0 136 54.4
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 5.1e-27 125.2 179 48.6
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 8.8e-27 124.4 184 45.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 8.8e-27 124.4 178 44.4
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 7.4e-26 121.3 189 46.6
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.3e-25 120.6 187 45.5
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.6e-23 112.8 143 51.0
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 4.5e-23 112.1 187 44.4
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.3e-22 110.5 148 49.3
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.9e-21 106.7 188 41.0
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.7e-20 102.8 126 46.8
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 5.1e-19 98.6 193 38.9
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 2.0e-18 96.7 175 39.4
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.6e-18 96.3 189 40.2
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 5.7e-18 95.1 191 39.3
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.7e-17 93.6 118 50.8
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 2.6e-15 86.3 179 37.4
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 5.9e-15 85.1 184 39.7
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 1.0e-14 84.3 74 66.2
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-14 83.6 190 35.8
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 5.5e-13 78.6 179 35.8
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 3.6e-12 75.9 74 52.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.8e-11 73.6 169 37.3
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.5e-10 70.5 127 37.8
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.6e-10 69.7 130 40.0
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 5.7e-10 68.6 174 32.8
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 3.7e-09 65.9 178 33.1
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 8.2e-09 64.7 86 51.2


User provided reference genes

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