Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 7.3e-85 317.4 185 100.0
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.4e-48 196.8 186 66.1
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.6e-44 183.3 186 67.7
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 6.9e-43 177.9 189 59.8
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.0e-42 176.4 188 62.2
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 2.0e-42 176.4 180 60.0
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.6e-42 176.0 161 64.0
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 3.4e-42 175.6 190 61.1
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 3.4e-42 175.6 201 61.2
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 2.2e-41 172.9 189 56.1
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 3.8e-41 172.2 185 60.0
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 8.5e-41 171.0 180 59.4
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 3.2e-40 169.1 180 57.2
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 4.2e-40 168.7 185 55.1
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 4.2e-40 168.7 182 61.0
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.1e-39 166.4 188 58.5
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 3.6e-39 165.6 185 55.7
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 6.1e-39 164.9 184 58.2
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 6.1e-39 164.9 182 56.0
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.8e-38 163.3 151 62.3
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 3.0e-38 162.5 178 56.7
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 5.1e-38 161.8 191 57.1
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 6.7e-38 161.4 191 56.5
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 8.8e-38 161.0 186 59.1
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 8.8e-38 161.0 181 54.7
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 8.8e-38 161.0 185 57.8
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 7.4e-37 157.9 185 57.8
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 7.4e-37 157.9 190 54.2
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 7.4e-37 157.9 165 60.6
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 7.4e-37 157.9 188 56.4
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 9.7e-37 157.5 187 56.1
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.3e-36 157.1 187 55.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.7e-36 156.8 186 55.4
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 1.7e-36 156.8 188 54.3
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.3e-35 151.8 163 62.6
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 9.1e-35 151.0 162 57.4
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.5e-34 150.2 184 53.8
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.0e-34 149.8 184 54.3
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 2.0e-34 149.8 157 57.3
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 4.5e-34 148.7 214 48.6
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 7.7e-34 147.9 185 53.5
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 7.7e-34 147.9 185 53.5
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 1.3e-33 147.1 184 53.3
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 1.3e-33 147.1 171 53.2
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.7e-33 146.7 176 55.1
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 2.2e-33 146.4 230 46.1
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 5.0e-33 145.2 190 51.6
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 6.5e-33 144.8 226 45.6
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 8.5e-33 144.4 185 52.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 8.5e-33 144.4 190 52.6
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 8.5e-33 144.4 184 53.8
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.1e-32 144.1 227 44.9
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.4e-32 143.7 183 50.8
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 1.4e-32 143.7 191 55.0
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.4e-32 143.7 164 55.5
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 2.5e-32 142.9 176 52.8
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 3.2e-32 142.5 202 51.5
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 3.2e-32 142.5 181 55.8
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 4.2e-32 142.1 190 53.2
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.2e-32 142.1 207 47.3
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 5.5e-32 141.7 170 50.0
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 7.2e-32 141.4 226 45.6
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 7.2e-32 141.4 184 56.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 9.4e-32 141.0 188 48.9
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 9.4e-32 141.0 163 61.3
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.6e-31 140.2 192 47.4
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.6e-31 140.2 184 49.5
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.1e-31 139.8 160 55.0
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 2.1e-31 139.8 168 59.5
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 2.7e-31 139.4 168 51.8
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 3.6e-31 139.0 179 54.2
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 3.6e-31 139.0 203 52.7
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 7.9e-31 137.9 161 54.0
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-30 136.7 182 48.4
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.8e-30 136.7 182 48.4
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 8.8e-30 134.4 164 53.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-29 134.0 185 50.8
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.5e-29 133.7 188 48.4
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.0e-29 133.3 187 52.9
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.3e-29 132.5 191 52.4
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.8e-28 129.4 202 49.0
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 2.8e-28 129.4 184 52.2
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.8e-28 128.6 185 49.7
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.4e-27 127.1 187 47.6
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 1.4e-27 127.1 120 63.3
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-27 126.7 190 47.4
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.4e-27 126.3 183 50.8
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.4e-27 126.3 183 50.8
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 3.8e-25 119.0 180 48.3
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.5e-24 117.1 200 44.5
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 7.2e-24 114.8 183 48.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 9.4e-24 114.4 147 51.0
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.6e-23 113.6 183 48.6
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.6e-23 113.6 157 52.9
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 2.7e-23 112.8 183 48.1
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.4e-22 110.5 189 49.2
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 5.2e-22 108.6 189 45.5
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.6e-21 106.3 145 46.9
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 9.7e-21 104.4 152 48.0
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.7e-20 103.6 163 47.9
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.2e-20 103.2 188 50.5
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.4e-19 100.5 149 53.7
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.8e-19 100.1 152 50.7
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 1.3e-17 94.0 197 40.6
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.7e-17 93.6 110 56.4
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.9e-17 92.8 112 52.7
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 5.0e-17 92.0 145 47.6
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.2e-16 89.4 126 47.6
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 7.2e-16 88.2 145 44.8
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.0e-14 82.4 132 48.5
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 8.8e-14 81.3 63 69.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 8.8e-14 81.3 119 52.1
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 9.1e-11 71.2 74 58.1
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 3.5e-10 69.3 144 39.6
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.0e-09 67.8 144 39.6
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.5e-08 63.9 66 51.5
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 2.8e-07 59.7 187 39.6
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 4.7e-07 58.9 61 59.0
Cpa.g.sc9.172 Carica papaya HOM05D006618 ORTHO05D008291 2.3e-06 56.6 34 79.4
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 5.2e-06 55.5 67 50.7


User provided reference genes

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