Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G067300 Manihot esculenta HOM05D000707 ORTHO05D008008 1.1e-56 223.0 112 100.0
Manes.01G214400 Manihot esculenta HOM05D000707 ORTHO05D008008 8.8e-17 90.5 92 53.3
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 6.1e-10 67.8 88 43.2
Gohir.A12G008800 Gossypium hirsutum HOM05D000707 ORTHO05D008008 1.5e-08 63.2 84 40.5
Nitab4.5_0000824g0040 Nicotiana tabacum HOM05D000707 ORTHO05D008008 1.5e-08 63.2 84 42.9
CAN.G426.34 Capsicum annuum HOM05D000707 ORTHO05D008008 4.4e-08 61.6 86 40.7
Nitab4.5_0009550g0010 Nicotiana tabacum HOM05D000707 ORTHO05D008008 5.7e-08 61.2 84 41.7
FAN27G0750 Fragaria x ananassa HOM05D000707 ORTHO05D008008 7.5e-08 60.8 90 43.3
Sabra14G0100300 Salix brachista HOM05D000707 ORTHO05D008008 7.5e-08 60.8 84 45.2
Gohir.D12G008500 Gossypium hirsutum HOM05D000707 ORTHO05D008008 9.8e-08 60.5 84 39.3
Gorai.008G008400 Gossypium raimondii HOM05D000707 ORTHO05D008008 9.8e-08 60.5 84 39.3
FAN20G0483 Fragaria x ananassa HOM05D000707 ORTHO05D008008 1.3e-07 60.1 92 42.4
Lj1g0005138 Lotus japonicus HOM05D000707 ORTHO05D008008 1.3e-07 60.1 90 38.9
COL.COLO4_08017 Corchorus olitorius HOM05D000143 ORTHO05D008008 1.7e-07 59.7 86 41.9
Oeu034816.2 Olea europaea HOM05D000707 ORTHO05D008008 1.7e-07 59.7 85 40.0
Peaxi162Scf00067g01119 Petunia axillaris HOM05D000707 ORTHO05D008008 1.7e-07 59.7 81 40.7
Potri.014G134601 Populus trichocarpa HOM05D000707 ORTHO05D008008 1.7e-07 59.7 87 42.5
FvH4_2g24910 Fragaria vesca HOM05D000707 ORTHO05D008008 4.8e-07 58.2 96 40.6
Phvul.001G203000 Phaseolus vulgaris HOM05D000707 ORTHO05D008008 4.8e-07 58.2 91 35.2
vmacro02501 Vaccinium macrocarpon HOM05D000707 ORTHO05D008008 4.8e-07 58.2 85 36.5
VMungo1383G1467 Vigna mungo HOM05D000707 ORTHO05D008008 4.8e-07 58.2 85 37.6
Ciclev10020545m.g Citrus clementina HOM05D000707 ORTHO05D008008 6.3e-07 57.8 92 37.0
CSS0014157 Camellia sinensis var. sinensis HOM05D000707 ORTHO05D008008 8.3e-07 57.4 92 38.0
Lsat_1_v5_gn_9_4901 Lactuca sativa HOM05D000707 ORTHO05D008008 8.3e-07 57.4 82 36.6
SGA_v2.0_scaffold1G00417 Striga asiatica HOM05D000707 ORTHO05D008008 1.4e-06 56.6 84 40.5
Glyma.19G207100 Glycine max HOM05D000707 ORTHO05D008008 1.8e-06 56.2 92 30.4
Potri.002G208100 Populus trichocarpa HOM05D000707 ORTHO05D008008 1.8e-06 56.2 86 43.0
PGSC0003DMG400011378 Solanum tuberosum HOM05D000707 ORTHO05D008008 1.8e-06 56.2 81 40.7
TAR636G1228 Trochodendron aralioides HOM05D000707 ORTHO05D008008 1.8e-06 56.2 113 31.0
Thecc.01G292100 Theobroma cacao HOM05D000707 ORTHO05D008008 2.4e-06 55.8 83 41.0
MSTRG.18186 Avicennia marina HOM05D000707 ORTHO05D008008 3.1e-06 55.5 84 42.9
Glyma.03G209800 Glycine max HOM05D000707 ORTHO05D008008 5.4e-06 54.7 91 33.0
Lj2A1186G33 Lonicera japonica HOM05D000707 ORTHO05D008008 7.0e-06 54.3 87 35.6
PSO210G0725 Papaver somniferum HOM05D000707 ORTHO05D008008 7.0e-06 54.3 85 32.9


User provided reference genes

Program Settings