Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 2.3e-137 492.3 251 100.0
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 3.4e-77 292.4 254 59.1
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.0e-76 290.8 258 62.0
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 3.8e-76 288.9 256 59.4
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 2.5e-75 286.2 254 59.8
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.6e-74 283.5 239 60.7
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 6.0e-74 281.6 243 62.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 3.3e-72 275.8 252 58.7
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.8e-71 272.7 266 54.1
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 3.7e-71 272.3 252 57.1
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 8.2e-71 271.2 245 58.4
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 6.9e-70 268.1 256 59.4
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 6.9e-70 268.1 266 53.4
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 3.4e-69 265.8 259 54.4
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 5.8e-69 265.0 267 53.6
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 5.8e-69 265.0 255 57.3
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.0e-68 264.2 249 57.8
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.0e-68 264.2 256 57.8
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 1.3e-68 263.8 259 54.1
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.2e-68 263.1 267 53.9
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 2.2e-68 263.1 254 60.2
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 3.8e-68 262.3 260 56.5
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 8.4e-68 261.2 253 55.7
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.1e-67 260.8 253 55.7
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 1.1e-67 260.8 263 54.8
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.9e-67 260.0 253 55.7
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.9e-67 260.0 257 56.4
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.5e-67 259.6 270 53.0
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.2e-67 259.2 248 57.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 4.2e-67 258.8 256 53.5
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.5e-67 258.5 259 56.4
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 9.3e-67 257.7 260 53.1
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.0e-65 254.2 269 52.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-65 253.8 253 54.5
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 5.1e-65 251.9 257 54.5
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.5e-64 249.6 251 53.4
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.5e-64 249.6 251 53.4
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 3.3e-64 249.2 268 50.7
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 4.3e-64 248.8 263 52.1
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 7.4e-64 248.1 253 54.5
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 6.3e-63 245.0 253 53.8
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 8.2e-63 244.6 258 54.3
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 1.4e-62 243.8 251 55.8
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.4e-62 243.8 248 55.6
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 9.0e-62 241.1 237 54.4
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 7.7e-61 238.0 258 53.9
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.0e-60 237.7 252 51.6
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.7e-60 236.9 248 51.6
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 2.2e-60 236.5 254 52.0
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 2.1e-58 229.9 254 53.1
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 3.6e-58 229.2 243 51.0
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 6.7e-57 224.9 249 50.6
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 6.3e-55 218.4 254 46.5
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 2.4e-54 216.5 253 47.4
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 2.4e-54 216.5 247 53.0
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 3.1e-54 216.1 253 46.6
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.5e-53 213.8 272 47.8
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 2.0e-53 213.4 259 47.5
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 3.4e-53 212.6 242 53.3
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 4.5e-53 212.2 253 48.2
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 5.9e-53 211.8 238 50.8
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 8.5e-52 208.0 229 50.2
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 8.5e-52 208.0 260 46.5
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.9e-51 206.8 260 48.1
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 2.5e-51 206.5 254 46.1
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 2.5e-51 206.5 237 51.5
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 4.2e-51 205.7 186 58.1
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 2.1e-50 203.4 270 42.2
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.4e-49 200.7 251 48.2
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.8e-49 200.3 186 55.4
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 2.3e-49 199.9 186 54.8
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 6.7e-49 198.4 155 63.9
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 1.7e-47 193.7 227 50.2
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 4.8e-47 192.2 189 51.3
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 8.2e-47 191.4 265 43.0
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 1.8e-46 190.3 229 44.5
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 2.6e-45 186.4 270 42.6
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 6.5e-44 181.8 229 48.0
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.1e-43 181.0 275 41.1
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.1e-43 181.0 253 43.9
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 5.5e-43 178.7 231 45.0
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 7.2e-43 178.3 129 63.6
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.5e-40 170.6 249 41.8
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.0e-40 170.2 187 49.2
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 4.4e-40 169.1 182 48.9
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 4.4e-40 169.1 187 48.7
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 7.5e-40 168.3 182 48.9
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.3e-39 167.5 218 47.2
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 2.2e-39 166.8 314 38.2
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 3.7e-39 166.0 185 49.2
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.2e-36 156.8 130 60.0
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.9e-36 156.4 252 37.7
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.5e-35 154.1 251 37.5
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 2.6e-32 143.3 296 36.8
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.6e-26 124.0 232 36.6
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.3e-25 120.2 130 45.4
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.2e-21 107.8 119 46.2
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 7.7e-21 105.1 253 31.2
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 8.6e-20 101.7 110 45.5
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.6e-18 97.4 251 30.7
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.8e-18 96.7 115 43.5
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-16 90.9 291 28.2
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 7.5e-16 88.6 204 32.8
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.2e-15 87.0 114 43.9
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 3.6e-10 69.7 131 37.4
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.0e-09 68.2 253 26.5
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 1.5e-08 64.3 95 38.9
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 3.4e-08 63.2 64 42.2
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 8.3e-07 58.5 53 50.9


User provided reference genes

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