Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 3.5e-197 691.4 343 100.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.4e-169 599.7 342 86.5
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.4e-168 595.1 339 85.5
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 3.7e-167 591.7 332 86.7
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 1.4e-166 589.7 335 85.4
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.4e-166 589.7 338 86.1
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.4e-166 589.0 342 84.5
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.0e-165 585.9 343 84.8
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 6.6e-164 580.9 343 84.5
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.2e-161 571.2 330 84.5
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 5.2e-161 571.2 331 84.0
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 6.8e-161 570.9 384 75.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.2e-160 570.1 331 85.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.0e-160 569.3 321 86.9
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 3.4e-160 568.5 339 84.4
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.8e-160 567.8 383 75.5
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.3e-159 566.6 321 86.6
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.9e-159 564.7 342 82.2
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 6.4e-159 564.3 343 81.3
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.9e-158 562.8 341 80.9
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.2e-158 562.0 327 84.7
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 9.2e-158 560.5 341 80.6
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.7e-157 558.9 330 83.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 4.6e-157 558.1 341 80.6
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 7.8e-157 557.4 327 84.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-156 556.6 330 82.7
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.7e-156 556.2 343 81.6
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 5.1e-156 554.7 328 83.2
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 5.1e-156 554.7 333 81.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 8.6e-156 553.9 339 81.1
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.3e-155 552.0 335 80.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 7.3e-155 550.8 345 82.0
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 4.7e-154 548.1 317 83.3
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 4.7e-154 548.1 337 80.1
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 6.2e-154 547.7 346 78.3
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 8.1e-154 547.4 305 89.2
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.1e-153 547.0 320 84.4
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.4e-153 546.6 343 79.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 3.1e-153 545.4 325 84.0
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 5.2e-153 544.7 337 79.8
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 6.8e-153 544.3 337 79.5
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 7.5e-152 540.8 341 78.6
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.3e-151 540.0 338 79.3
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.3e-151 540.0 314 83.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.3e-151 540.0 341 78.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.7e-151 539.7 328 80.5
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.9e-151 538.9 326 81.0
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.9e-151 538.9 326 80.4
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.7e-151 538.5 338 78.7
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.7e-151 538.5 326 80.1
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.9e-151 538.1 343 77.8
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.4e-151 537.7 338 80.2
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.4e-151 537.7 338 80.2
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 6.4e-151 537.7 323 83.0
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.4e-150 534.6 352 77.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.4e-150 534.6 349 77.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 7.1e-150 534.3 338 79.0
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.2e-149 533.5 321 81.0
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.2e-149 533.5 328 80.2
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.6e-149 533.1 342 78.4
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 4.6e-149 531.6 313 84.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.0e-148 530.4 327 80.4
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.7e-148 529.6 339 77.6
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.6e-148 527.7 352 75.9
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 8.6e-148 527.3 330 78.8
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.1e-147 526.9 330 79.1
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 7.3e-147 524.2 321 80.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.8e-145 519.6 321 79.8
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 4.0e-145 518.5 326 79.8
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.6e-144 515.8 326 79.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.4e-144 515.0 375 71.2
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.8e-143 511.9 305 83.3
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 6.4e-143 511.1 299 84.3
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.4e-142 510.0 330 77.6
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 8.7e-140 500.7 286 85.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 5.6e-139 498.0 306 80.7
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.6e-138 496.5 370 70.0
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.7e-138 495.0 360 70.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.7e-138 495.0 360 70.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.8e-137 493.0 326 76.4
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 4.0e-137 491.9 305 82.3
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 5.3e-137 491.5 361 71.2
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.5e-136 490.0 335 72.8
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.3e-135 486.9 344 71.8
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 2.2e-135 486.1 283 85.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-134 483.4 375 67.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 3.2e-134 482.3 331 73.7
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 5.4e-134 481.5 330 73.3
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.6e-133 478.4 394 64.7
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.0e-132 475.7 314 73.9
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 4.3e-131 471.9 331 74.3
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 7.3e-131 471.1 267 84.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 8.1e-130 467.6 288 79.9
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.1e-125 453.0 316 70.9
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.5e-125 452.2 290 79.0
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.6e-125 451.8 381 64.8
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.5e-123 446.8 280 80.4
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 2.2e-119 433.0 263 81.7
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 4.9e-119 431.8 288 76.0
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.5e-118 429.5 326 69.0
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.5e-115 420.2 303 69.3
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.8e-111 405.6 317 62.1
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.9e-111 405.2 234 86.3
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 8.4e-111 404.4 292 68.8
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.2e-109 400.6 340 62.9
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.1e-109 399.8 285 72.3
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 4.6e-109 398.7 320 61.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 2.1e-101 373.2 335 55.5
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.0e-100 370.9 317 59.3
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.4e-100 370.5 288 68.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.5e-96 357.1 239 74.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.4e-94 350.5 261 68.6
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 9.7e-91 337.8 233 70.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.3e-90 337.4 314 53.5
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.6e-85 319.3 221 72.9
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.3e-84 316.6 225 72.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.2e-71 273.5 364 43.1
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.8e-60 237.3 181 69.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 2.3e-60 236.9 150 81.3
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-55 221.1 143 77.6
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.4e-49 200.3 332 38.0
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 2.5e-46 190.3 129 72.1
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 3.7e-42 176.4 107 73.8
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 4.1e-41 172.9 282 39.0
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-35 154.8 97 76.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.1e-20 105.1 82 64.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 9.3e-17 92.0 71 63.4
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 2.7e-16 90.5 63 73.0
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 4.8e-13 79.7 50 82.0


User provided reference genes

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