Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 5.1e-47 190.7 92 100.0
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 1.8e-15 85.9 52 78.8
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 3.0e-15 85.1 57 68.4
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 1.3e-13 79.7 52 75.0
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 1.7e-13 79.3 62 59.7
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.7e-13 79.3 53 73.6
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 1.7e-13 79.3 52 76.9
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 2.8e-13 78.6 52 75.0
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 2.8e-13 78.6 52 75.0
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 3.7e-13 78.2 52 69.2
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 4.9e-13 77.8 52 71.2
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 8.3e-13 77.0 52 65.4
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.1e-12 76.6 52 75.0
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.1e-12 76.6 52 75.0
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.1e-12 76.6 52 75.0
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 1.4e-12 76.3 52 63.5
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 1.4e-12 76.3 52 67.3
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 1.4e-12 76.3 52 65.4
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 1.8e-12 75.9 57 59.6
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 3.1e-12 75.1 52 65.4
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 3.1e-12 75.1 52 73.1
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 5.4e-12 74.3 56 60.7
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 7.0e-12 73.9 45 75.6
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 1.3e-10 69.7 52 59.6
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 1.7e-10 69.3 52 65.4
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 1.7e-10 69.3 52 65.4
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 2.3e-10 68.9 52 67.3
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 2.3e-10 68.9 45 75.6
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 3.8e-10 68.2 52 61.5
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 5.0e-10 67.8 45 73.3
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 3.3e-09 65.1 52 59.6
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 4.3e-09 64.7 52 61.5
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 1.8e-07 59.3 54 53.7
Gohir.A07G139100 Gossypium hirsutum HOM05D008687 ORTHO05D010822 3.0e-07 58.5 46 67.4
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 4.0e-07 58.2 34 76.5
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 4.0e-07 58.2 34 76.5
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 4.0e-07 58.2 52 55.8
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 6.8e-07 57.4 47 51.1
GSVIVG01027061001 Vitis vinifera HOM05D008687 ORTHO05D010822 8.9e-07 57.0 52 55.8
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 2.6e-06 55.5 33 75.8
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 2.6e-06 55.5 31 80.6
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 2.6e-06 55.5 31 80.6
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 2.6e-06 55.5 44 63.6


User provided reference genes

Program Settings