Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 2.2e-44 182.2 109 100.0
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 1.9e-32 142.5 109 72.5
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 4.0e-22 108.2 120 55.8
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 2.6e-21 105.5 104 63.5
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 6.3e-20 100.9 105 57.1
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.8e-19 99.4 113 55.8
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 1.8e-19 99.4 106 56.6
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 4.1e-19 98.2 112 58.9
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 1.6e-18 96.3 109 56.0
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.0e-18 95.9 101 56.4
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 3.5e-18 95.1 86 60.5
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 4.5e-18 94.7 120 52.5
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 7.8e-18 94.0 109 52.3
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.0e-17 93.6 102 56.9
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.3e-17 93.2 101 55.4
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 1.7e-17 92.8 98 56.1
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 3.8e-17 91.7 106 56.6
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 8.6e-17 90.5 106 55.7
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 1.1e-16 90.1 85 57.6
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 1.5e-16 89.7 105 51.4
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.9e-16 89.4 103 58.3
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.5e-16 89.0 102 52.0
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.3e-16 88.6 99 52.5
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 3.3e-16 88.6 99 52.5
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 3.3e-16 88.6 60 73.3
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 5.6e-16 87.8 66 68.2
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 5.6e-16 87.8 61 72.1
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 7.3e-16 87.4 63 71.4
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 9.5e-16 87.0 99 51.5
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 9.5e-16 87.0 104 51.0
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 1.2e-15 86.7 99 56.6
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.2e-15 86.7 105 46.7
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 1.2e-15 86.7 66 65.2
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 1.6e-15 86.3 70 62.9
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.6e-15 86.3 70 62.9
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.1e-15 85.9 70 62.9
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 2.8e-15 85.5 71 64.8
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 3.6e-15 85.1 70 61.4
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.7e-15 84.7 110 54.5
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 4.7e-15 84.7 104 49.0
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 6.1e-15 84.3 112 51.8
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 8.0e-15 84.0 105 52.4
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 1.4e-14 83.2 64 65.6
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.8e-14 82.8 60 73.3
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 3.0e-14 82.0 89 53.9
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 4.0e-14 81.6 64 67.2
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.0e-14 81.6 70 60.0
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 4.0e-14 81.6 123 47.2
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 5.2e-14 81.3 64 67.2
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 5.2e-14 81.3 103 48.5
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 6.8e-14 80.9 95 52.6
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 8.9e-14 80.5 105 46.7
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 1.2e-13 80.1 93 51.6
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.2e-13 80.1 94 50.0
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 2.0e-13 79.3 100 50.0
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 3.4e-13 78.6 98 50.0
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 5.8e-13 77.8 95 51.6
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 5.8e-13 77.8 95 51.6
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 5.8e-13 77.8 95 51.6
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 5.8e-13 77.8 98 49.0
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 5.8e-13 77.8 98 49.0
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 5.8e-13 77.8 68 63.2
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 9.8e-13 77.0 98 49.0
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 9.8e-13 77.0 98 49.0
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 9.8e-13 77.0 98 49.0
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 9.8e-13 77.0 97 49.5
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 1.3e-12 76.6 89 50.6
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 1.7e-12 76.3 98 48.0
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 2.2e-12 75.9 62 61.3
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.2e-12 75.9 62 62.9
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 2.2e-12 75.9 58 67.2
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 2.9e-12 75.5 86 50.0
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 2.9e-12 75.5 66 62.1
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 2.9e-12 75.5 67 65.7
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 2.9e-12 75.5 106 50.0
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 3.7e-12 75.1 98 49.0
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 4.9e-12 74.7 95 49.5
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 4.9e-12 74.7 97 44.3
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 6.4e-12 74.3 53 71.7
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 6.4e-12 74.3 69 56.5
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 8.3e-12 73.9 91 48.4
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.1e-11 73.6 60 63.3
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.4e-11 73.2 56 64.3
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 3.2e-11 72.0 58 60.3
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 4.1e-11 71.6 98 49.0
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 5.4e-11 71.2 67 55.2
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 5.4e-11 71.2 99 46.5
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 5.4e-11 71.2 98 48.0
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 5.4e-11 71.2 96 43.8
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 5.4e-11 71.2 61 57.4
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 9.2e-11 70.5 54 68.5
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 9.2e-11 70.5 69 58.0
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 1.2e-10 70.1 52 65.4
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 1.2e-10 70.1 55 58.2
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 1.6e-10 69.7 98 45.9
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 1.6e-10 69.7 83 45.8
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 1.6e-10 69.7 69 53.6
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.0e-10 69.3 97 44.3
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 3.5e-10 68.6 99 43.4
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 3.5e-10 68.6 99 43.4
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 3.5e-10 68.6 52 61.5
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 3.5e-10 68.6 97 47.4
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 6.0e-10 67.8 53 56.6
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 7.8e-10 67.4 69 49.3
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.3e-09 66.6 99 48.5
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 2.3e-09 65.9 60 55.0
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 3.0e-09 65.5 69 55.1
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 3.9e-09 65.1 55 60.0
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 5.0e-09 64.7 99 41.4
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 5.0e-09 64.7 67 53.7
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 6.6e-09 64.3 93 47.3
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 8.6e-09 63.9 59 54.2
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.1e-08 63.5 52 59.6
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 1.5e-08 63.2 67 50.7
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 1.5e-08 63.2 95 44.2
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.5e-08 63.2 55 58.2
Sed0017392 Sechium edule HOM05D006547 ORTHO05D008112 2.5e-08 62.4 52 53.8
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 2.5e-08 62.4 70 48.6
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 3.3e-08 62.0 70 50.0
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 4.3e-08 61.6 70 47.1
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 9.5e-08 60.5 102 40.2
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 1.2e-07 60.1 89 44.9
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 1.6e-07 59.7 95 37.9
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.6e-07 59.7 88 43.2
Gohir.D04G180550 Gossypium hirsutum HOM05D034510 ORTHO05D047560 1.8e-06 56.2 95 36.8
Gorai.012G173700 Gossypium raimondii HOM05D034510 ORTHO05D047560 1.8e-06 56.2 95 36.8
Nn3g20922 Nelumbo nucifera HOM05D006973 ORTHO05D008636 5.2e-06 54.7 54 46.3
Nn6g34359 Nelumbo nucifera HOM05D006973 ORTHO05D008636 6.8e-06 54.3 54 48.1


User provided reference genes

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