Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 7.0e-113 410.6 204 100.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 4.4e-67 258.5 205 66.3
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.4e-65 253.4 205 65.4
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 3.6e-61 238.8 205 62.4
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.6e-59 232.6 203 61.6
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.6e-56 223.4 204 61.3
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.1e-56 223.0 191 61.3
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.5e-56 222.2 201 58.7
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.0e-55 220.7 179 63.1
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 6.7e-55 218.0 193 60.1
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.1e-54 217.2 165 70.9
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.9e-54 216.5 173 64.2
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.3e-54 215.7 175 64.0
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 9.6e-54 214.2 173 63.6
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.1e-53 213.0 193 63.7
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 6.2e-53 211.5 186 59.7
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 8.1e-53 211.1 174 61.5
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 8.1e-53 211.1 174 61.5
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 3.1e-52 209.1 175 61.1
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 9.0e-52 207.6 174 60.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.7e-50 203.4 189 60.3
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 2.2e-50 203.0 181 59.7
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 6.5e-50 201.4 185 59.5
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 6.5e-50 201.4 189 58.7
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-49 200.7 209 55.5
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.1e-49 200.7 196 59.7
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.9e-49 199.9 179 58.1
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 3.2e-49 199.1 199 56.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 5.5e-49 198.4 179 59.8
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 5.5e-49 198.4 165 58.8
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.7e-48 196.1 211 54.0
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 7.9e-48 194.5 179 53.1
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.0e-47 194.1 205 53.7
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.3e-47 193.0 167 60.5
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.3e-47 193.0 167 57.5
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 5.1e-47 191.8 171 56.1
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 6.7e-47 191.4 191 54.5
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.5e-46 190.3 177 56.5
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.9e-46 189.9 209 53.1
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.5e-46 189.5 205 53.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 3.3e-46 189.1 189 52.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 4.3e-46 188.7 206 52.4
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 7.4e-46 188.0 189 53.4
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.1e-44 184.1 182 54.9
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.4e-44 183.0 180 56.1
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 6.9e-44 181.4 157 59.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 6.9e-44 181.4 179 56.4
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 9.0e-44 181.0 162 57.4
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-43 180.3 148 62.2
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.5e-43 180.3 176 56.8
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 2.0e-43 179.9 171 53.8
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.4e-43 179.1 160 57.5
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 7.6e-43 177.9 154 60.4
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 5.0e-42 175.3 206 50.0
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 8.5e-42 174.5 185 52.4
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 8.5e-42 174.5 159 56.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.9e-41 173.3 176 50.6
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 2.5e-41 172.9 187 50.8
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 5.5e-41 171.8 169 54.4
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 7.2e-41 171.4 174 51.7
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 9.3e-41 171.0 160 51.9
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.7e-40 169.5 158 52.5
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.7e-40 169.5 179 49.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.6e-40 169.1 169 52.7
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 3.6e-40 169.1 183 52.5
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 4.6e-40 168.7 173 52.6
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-39 167.2 148 60.1
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.3e-39 166.4 178 51.7
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 3.0e-39 166.0 158 51.3
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.0e-39 166.0 156 59.6
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.1e-39 165.2 163 52.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.5e-38 163.7 158 51.9
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.9e-38 163.3 156 54.5
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.9e-38 163.3 159 54.1
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 7.4e-38 161.4 156 50.6
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.4e-38 161.4 158 50.0
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.4e-38 161.4 158 50.0
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 9.7e-38 161.0 159 50.3
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 9.7e-38 161.0 158 51.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 9.7e-38 161.0 158 51.3
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 9.7e-38 161.0 156 58.3
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.6e-37 160.2 176 51.7
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.2e-37 159.8 158 51.3
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.2e-37 159.8 179 50.8
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.2e-37 159.8 156 57.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.1e-36 157.5 165 49.1
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.8e-36 156.8 182 50.0
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.4e-36 156.4 182 47.8
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 3.1e-36 156.0 158 50.0
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 3.1e-36 156.0 158 50.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 9.0e-36 154.5 185 46.5
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.0e-35 153.3 118 65.3
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.4e-35 152.5 137 56.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.3e-34 150.6 203 45.8
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.9e-33 146.7 129 58.9
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.2e-33 145.6 155 51.0
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 5.5e-33 145.2 132 57.6
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 7.2e-33 144.8 128 59.4
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.7e-32 142.9 177 44.6
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 5.1e-31 138.7 180 41.1
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 8.8e-31 137.9 139 53.2
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.6e-30 136.3 174 48.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.4e-28 130.6 164 47.6
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 4.5e-27 125.6 113 55.8
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.2e-25 119.4 119 49.6
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.4e-25 117.9 109 56.0
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 4.7e-24 115.5 97 62.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.3e-20 102.1 85 52.9
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 9.7e-14 81.3 91 50.5
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 6.3e-13 78.6 154 34.4
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 9.1e-12 74.7 127 37.8
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.2e-11 74.3 79 49.4
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 8.0e-08 61.6 37 73.0


User provided reference genes

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