Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-82 309.7 156 100.0
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 4.3e-54 214.9 160 71.2
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 4.3e-54 214.9 157 69.4
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.1e-53 212.6 157 72.0
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.7e-53 211.8 164 70.1
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 2.4e-52 209.1 159 69.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.5e-51 206.5 157 70.7
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.0e-51 206.1 162 70.4
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 3.2e-49 198.7 158 66.5
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 4.2e-49 198.4 158 65.8
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 7.1e-49 197.6 158 66.5
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 2.1e-48 196.1 159 64.2
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 7.9e-48 194.1 157 66.2
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.9e-47 191.8 132 70.5
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 6.7e-47 191.0 157 65.0
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 8.7e-47 190.7 162 61.7
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.5e-46 189.9 165 61.2
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 3.3e-46 188.7 164 64.6
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 4.3e-46 188.3 161 62.7
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.3e-46 188.3 157 65.0
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.6e-45 186.4 157 63.7
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.1e-45 186.0 158 62.7
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 3.7e-45 185.3 151 64.9
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 6.2e-45 184.5 158 62.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.1e-44 183.7 140 64.3
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.4e-44 183.3 168 61.3
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.4e-44 183.3 165 60.0
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.8e-44 183.0 157 60.5
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 2.4e-44 182.6 158 63.9
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 2.4e-44 182.6 157 61.1
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.1e-44 182.2 151 60.9
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.1e-44 182.2 161 62.1
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.1e-44 182.2 159 61.0
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 4.0e-44 181.8 154 64.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 5.3e-44 181.4 125 68.8
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 9.0e-44 180.6 156 61.5
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.2e-43 180.3 158 58.9
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 3.4e-43 178.7 156 57.7
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.5e-43 178.3 157 62.4
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 4.5e-43 178.3 122 66.4
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 4.5e-43 178.3 124 71.0
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 5.8e-43 177.9 162 57.4
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 1.7e-42 176.4 156 58.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.7e-42 176.4 159 62.9
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 2.2e-42 176.0 163 60.7
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 2.9e-42 175.6 151 62.9
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 4.9e-42 174.9 146 58.9
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 6.5e-42 174.5 136 64.0
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 6.5e-42 174.5 157 63.7
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 6.5e-42 174.5 157 63.7
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.9e-41 172.9 151 60.3
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.5e-41 172.6 141 62.4
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 2.5e-41 172.6 118 70.3
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.5e-41 172.6 119 68.9
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 7.1e-41 171.0 163 57.1
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 9.3e-41 170.6 121 66.1
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 9.3e-41 170.6 156 55.1
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 1.2e-40 170.2 158 57.0
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.1e-40 169.5 163 57.1
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.1e-40 169.5 139 59.7
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.1e-40 169.5 122 71.3
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.7e-40 169.1 122 71.3
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.7e-40 169.1 168 57.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 3.5e-40 168.7 157 56.7
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.5e-40 168.7 157 61.8
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 7.9e-40 167.5 113 74.3
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.9e-40 167.5 136 64.0
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.3e-39 166.8 164 55.5
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.3e-39 166.8 121 66.9
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.3e-39 166.8 141 62.4
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.9e-39 165.2 140 60.7
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 5.1e-39 164.9 157 54.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.1e-39 164.9 108 70.4
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 8.7e-39 164.1 158 56.3
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.9e-38 162.9 148 58.1
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 7.4e-38 161.0 154 53.2
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 1.3e-37 160.2 159 55.3
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 1.3e-37 160.2 159 55.3
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.6e-37 159.8 149 54.4
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.6e-37 159.8 149 54.4
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.7e-37 158.7 159 55.3
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.7e-37 158.7 159 55.3
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 6.3e-37 157.9 157 52.2
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 6.3e-37 157.9 102 73.5
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.4e-36 156.8 159 56.6
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 1.4e-36 156.8 157 54.1
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.8e-36 156.4 160 53.8
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.3e-36 154.8 126 60.3
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 6.5e-34 147.9 126 58.7
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 8.5e-34 147.5 157 51.6
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.9e-33 146.4 118 62.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 2.5e-33 146.0 103 69.9
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 7.2e-33 144.4 133 57.9
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 2.1e-32 142.9 102 65.7
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 3.6e-32 142.1 87 75.9
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 3.6e-32 142.1 151 48.3
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 2.3e-31 139.4 126 57.1
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 6.7e-31 137.9 112 62.5
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 8.8e-31 137.5 99 62.6
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.1e-30 137.1 115 60.0
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 1.3e-29 133.7 135 54.1
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.8e-28 129.8 109 61.5
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 5.1e-23 111.7 122 50.0
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 2.6e-22 109.4 76 71.1
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.6e-19 99.4 96 57.3
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 5.9e-19 98.2 111 43.2
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 9.1e-12 74.3 76 43.4
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 5.9e-11 71.6 58 55.2
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.0e-10 70.9 96 36.5
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 3.8e-10 68.9 93 39.8
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 5.0e-10 68.6 70 34.3


User provided reference genes

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