Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 1.7e-45 185.7 96 100.0
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 3.1e-26 121.7 66 95.5
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 6.8e-18 94.0 62 75.8
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 9.9e-17 90.1 67 71.6
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 1.0e-13 80.1 69 63.8
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.9e-13 78.2 68 64.7
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 5.1e-13 77.8 58 67.2
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 2.5e-12 75.5 45 80.0
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 2.5e-12 75.5 62 67.7
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 4.3e-12 74.7 59 71.2
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 4.3e-12 74.7 45 82.2
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 5.6e-12 74.3 56 69.6
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 9.6e-12 73.6 60 65.0
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.6e-11 72.8 56 67.9
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 2.1e-11 72.4 45 75.6
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 2.1e-11 72.4 49 75.5
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 2.8e-11 72.0 49 67.3
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 4.7e-11 71.2 64 65.6
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 4.7e-11 71.2 57 64.9
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 4.7e-11 71.2 58 65.5
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 6.2e-11 70.9 44 77.3
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 6.2e-11 70.9 51 68.6
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 8.1e-11 70.5 44 75.0
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 8.1e-11 70.5 61 67.2
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 8.1e-11 70.5 45 75.6
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.1e-10 70.1 62 59.7
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 1.1e-10 70.1 44 79.5
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.4e-10 69.7 58 67.2
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 1.4e-10 69.7 45 71.1
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.4e-10 69.7 43 79.1
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.4e-10 69.7 43 79.1
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 1.4e-10 69.7 43 79.1
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.4e-10 69.7 63 61.9
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 1.8e-10 69.3 51 70.6
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 1.8e-10 69.3 56 67.9
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.8e-10 69.3 53 67.9
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 2.4e-10 68.9 50 72.0
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 2.4e-10 68.9 60 63.3
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 3.1e-10 68.6 60 66.7
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 3.1e-10 68.6 69 58.0
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 3.1e-10 68.6 50 66.0
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 4.0e-10 68.2 61 65.6
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 4.0e-10 68.2 60 61.7
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 5.2e-10 67.8 50 64.0
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 5.2e-10 67.8 57 66.7
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 6.8e-10 67.4 56 66.1
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 8.9e-10 67.0 44 77.3
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 8.9e-10 67.0 44 77.3
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 8.9e-10 67.0 59 64.4
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 1.2e-09 66.6 45 71.1
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.2e-09 66.6 44 75.0
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 1.2e-09 66.6 56 62.5
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 1.2e-09 66.6 58 62.1
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.5e-09 66.2 44 75.0
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 1.5e-09 66.2 56 64.3
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 1.5e-09 66.2 53 66.0
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.5e-09 66.2 53 66.0
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 2.0e-09 65.9 44 75.0
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 2.0e-09 65.9 46 73.9
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 2.6e-09 65.5 59 61.0
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 2.6e-09 65.5 43 74.4
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 2.6e-09 65.5 44 77.3
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 2.6e-09 65.5 39 79.5
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 2.6e-09 65.5 39 79.5
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 3.4e-09 65.1 37 83.8
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 3.4e-09 65.1 45 73.3
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 3.4e-09 65.1 56 62.5
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 4.4e-09 64.7 38 81.6
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 5.8e-09 64.3 50 64.0
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 5.8e-09 64.3 59 61.0
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 7.6e-09 63.9 56 60.7
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 7.6e-09 63.9 45 75.6
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 3.8e-08 61.6 47 72.3
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 4.9e-08 61.2 40 77.5
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 4.9e-08 61.2 39 74.4
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 4.9e-08 61.2 59 57.6
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 6.4e-08 60.8 53 64.2
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 8.4e-08 60.5 42 73.8
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 1.1e-07 60.1 36 83.3
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 1.4e-07 59.7 44 65.9
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.4e-07 59.7 41 73.2
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 1.9e-07 59.3 54 63.0
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 1.9e-07 59.3 54 63.0
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.9e-07 59.3 37 73.0
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.4e-07 58.9 40 75.0
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.4e-07 58.9 40 75.0
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.4e-07 58.9 40 75.0
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 3.2e-07 58.5 65 50.8
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.4e-07 57.8 48 68.8
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.4e-07 57.8 48 68.8
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 7.1e-07 57.4 46 67.4
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 7.1e-07 57.4 39 69.2
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 4.6e-06 54.7 60 50.0


User provided reference genes

Program Settings