Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G113532 Manihot esculenta HOM05D004379 ORTHO05D005186 6.4e-44 180.3 85 100.0
Manes.11G055900 Manihot esculenta HOM05D004379 ORTHO05D005186 1.4e-19 99.4 116 50.9
Duzib192G0219 Durio zibethinus HOM05D004379 ORTHO05D005186 1.5e-16 89.4 112 48.2
Duzib235G0719 Durio zibethinus HOM05D004379 ORTHO05D005186 4.1e-14 81.3 112 45.5
Glyma.08G212100 Glycine max HOM05D004379 ORTHO05D005186 1.2e-13 79.7 109 44.0
VMungo0331G0688 Vigna mungo HOM05D004379 ORTHO05D005186 2.6e-13 78.6 109 41.3
Glyma.07G030700 Glycine max HOM05D004379 ORTHO05D005186 3.8e-12 74.7 108 44.4
Phvul.010G155400 Phaseolus vulgaris HOM05D004379 ORTHO05D005186 3.8e-12 74.7 108 40.7
TAR383G0091 Trochodendron aralioides HOM05D004379 ORTHO05D005186 5.0e-12 74.3 107 43.0
CiPaw.02G156500 Carya illinoinensis HOM05D004379 ORTHO05D005186 6.5e-12 73.9 81 46.9
Gohir.A10G074000 Gossypium hirsutum HOM05D004379 ORTHO05D005186 8.5e-12 73.6 99 46.5
Gohir.D10G075800 Gossypium hirsutum HOM05D004379 ORTHO05D005186 1.1e-11 73.2 110 45.5
Gorai.011G083500 Gossypium raimondii HOM05D004379 ORTHO05D005186 1.1e-11 73.2 110 45.5
QL05p029537 Quercus lobata HOM05D004379 ORTHO05D005186 3.2e-11 71.6 104 41.3
Thecc.06G022000 Theobroma cacao HOM05D004379 ORTHO05D005186 4.2e-11 71.2 111 41.4
Actinidia08802 Actinidia chinensis HOM05D004379 ORTHO05D005186 9.4e-11 70.1 95 41.1
TPR.G38692 Trifolium pratense HOM05D004379 ORTHO05D005186 9.4e-11 70.1 110 40.0
COL.COLO4_12954 Corchorus olitorius HOM05D004379 ORTHO05D005186 3.6e-10 68.2 106 43.4
Lalb_Chr22g0350861 Lupinus albus HOM05D004379 ORTHO05D005186 3.6e-10 68.2 108 41.7
Nn8g39475 Nelumbo nucifera HOM05D004379 ORTHO05D005186 3.6e-10 68.2 110 41.8
CSS0024700 Camellia sinensis var. sinensis HOM05D004379 ORTHO05D005186 4.6e-10 67.8 116 39.7
CANSAT56G1089 Cannabis sativa HOM05D004379 ORTHO05D005186 4.6e-10 67.8 93 39.8
Glyma.15G008000 Glycine max HOM05D004379 ORTHO05D005186 1.8e-09 65.9 99 39.4
Atru.chr1.2986 Acer truncatum HOM05D004379 ORTHO05D005186 2.3e-09 65.5 121 38.8
Actinidia15991 Actinidia chinensis HOM05D004379 ORTHO05D005186 2.3e-09 65.5 93 36.6
Lj3g0013777 Lotus japonicus HOM05D004379 ORTHO05D005186 3.0e-09 65.1 99 41.4
EL10Ac9g21909 Beta vulgaris HOM05D004379 ORTHO05D005186 8.8e-09 63.5 109 35.8
Rhsim08G0213700 Rhododendron simsii HOM05D004379 ORTHO05D005186 1.5e-08 62.8 105 41.0
FAN05G0070 Fragaria x ananassa HOM05D004379 ORTHO05D005186 1.9e-08 62.4 116 37.9
MBI01_g38638_MAGBIO Magnolia biondii HOM05D004379 ORTHO05D005186 1.9e-08 62.4 110 37.3
Medtr4g010300 Medicago truncatula HOM05D004379 ORTHO05D005186 1.9e-08 62.4 111 37.8
arahy.Tifrunner.gnm1.ann1.131LTR Arachis hypogaea HOM05D004379 ORTHO05D005186 2.5e-08 62.0 114 38.6
Nn2g12051 Nelumbo nucifera HOM05D004379 ORTHO05D005186 3.3e-08 61.6 110 38.2
Prupe.3G085300 Prunus persica HOM05D004379 ORTHO05D005186 3.3e-08 61.6 115 40.0
FvH4_6g29870 Fragaria vesca HOM05D004379 ORTHO05D005186 5.7e-08 60.8 116 37.9
FAN14G0452 Fragaria x ananassa HOM05D004379 ORTHO05D005186 5.7e-08 60.8 116 37.9
arahy.Tifrunner.gnm1.ann1.4DH38B Arachis hypogaea HOM05D004379 ORTHO05D005186 7.4e-08 60.5 103 38.8
arahy.Tifrunner.gnm1.ann1.4K2N5B Arachis hypogaea HOM05D004379 ORTHO05D005186 7.4e-08 60.5 103 38.8
Ciclev10027032m.g Citrus clementina HOM05D004379 ORTHO05D005186 7.4e-08 60.5 58 58.6
MD02G1030200 Malus domestica HOM05D004379 ORTHO05D005186 9.7e-08 60.1 112 39.3
FAN09G2661 Fragaria x ananassa HOM05D004379 ORTHO05D005186 1.7e-07 59.3 109 38.5
Psat7g256400 Pisum sativum HOM05D004379 ORTHO05D005186 1.7e-07 59.3 59 44.1
CSS0000383 Camellia sinensis var. sinensis HOM05D004379 ORTHO05D005186 3.7e-07 58.2 108 36.1
MD17G1210000 Malus domestica HOM05D004379 ORTHO05D005186 4.8e-07 57.8 108 38.9
RcHm_v2.0_Chr2g0135761 Rosa chinensis HOM05D004379 ORTHO05D005186 8.2e-07 57.0 59 50.8
Psat5g302160 Pisum sativum HOM05D004379 ORTHO05D005186 1.1e-06 56.6 99 39.4
Migut.D01070 Erythranthe guttata HOM05D004379 ORTHO05D005186 1.4e-06 56.2 72 43.1
Hma1.2p1_0042F.1_g025560 Hydrangea macrophylla HOM05D004379 ORTHO05D005186 1.4e-06 56.2 57 45.6
Potri.018G130700 Populus trichocarpa HOM05D004379 ORTHO05D005186 1.4e-06 56.2 110 35.5
CSS0018376 Camellia sinensis var. sinensis HOM05D004379 ORTHO05D005186 1.8e-06 55.8 75 45.3
Medtr2g103780 Medicago truncatula HOM05D004379 ORTHO05D005186 2.4e-06 55.5 106 36.8
Aqoxy7G03687 Aquilegia oxysepala HOM05D004379 ORTHO05D005186 3.1e-06 55.1 104 36.5
FAN02G0226 Fragaria x ananassa HOM05D004379 ORTHO05D005186 3.1e-06 55.1 59 49.2
FAN17G1709 Fragaria x ananassa HOM05D004379 ORTHO05D005186 3.1e-06 55.1 59 49.2
Lsat_1_v5_gn_5_132021 Lactuca sativa HOM05D004379 ORTHO05D005186 4.1e-06 54.7 107 32.7
Hund06564 Selenicereus undatus HOM05D004379 ORTHO05D005186 4.1e-06 54.7 116 34.5
Thecc.09G025200 Theobroma cacao HOM05D004379 ORTHO05D005186 6.9e-06 53.9 112 35.7
COL.COLO4_18855 Corchorus olitorius HOM05D004379 ORTHO05D005186 9.1e-06 53.5 105 39.0


User provided reference genes

Program Settings