Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 7.8e-163 577.0 282 100.0
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.4e-135 486.5 281 81.9
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.7e-123 445.7 281 74.7
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 5.7e-121 438.0 285 73.3
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.8e-119 433.0 282 71.3
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 9.0e-119 430.6 283 73.9
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 9.0e-119 430.6 282 72.3
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.0e-117 427.2 279 72.4
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.7e-117 426.4 281 71.2
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.7e-117 426.4 283 70.7
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.9e-117 425.6 281 71.2
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.8e-117 425.2 261 74.7
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 8.5e-117 424.1 285 70.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 5.5e-116 421.4 279 72.0
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.6e-115 418.7 281 70.8
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 3.6e-115 418.7 280 71.8
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 3.0e-114 415.6 282 67.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.8e-114 414.1 281 69.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.1e-113 413.7 278 69.1
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 2.0e-113 412.9 281 71.2
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.5e-113 412.5 281 68.3
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 3.3e-113 412.1 282 69.1
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.3e-113 412.1 282 68.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 3.3e-113 412.1 281 69.0
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.3e-113 411.8 276 70.3
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 9.7e-113 410.6 282 69.1
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.3e-112 410.2 281 70.1
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 2.8e-112 409.1 282 69.1
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 3.7e-112 408.7 283 70.0
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 3.7e-112 408.7 280 68.6
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 6.3e-112 407.9 284 69.4
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 8.2e-112 407.5 304 64.8
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.1e-111 407.1 281 69.4
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.1e-111 407.1 282 68.8
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.8e-111 406.4 253 74.7
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 3.1e-111 405.6 280 70.0
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 4.1e-111 405.2 281 68.7
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 6.9e-111 404.4 279 68.8
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 9.1e-111 404.1 282 68.4
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 9.1e-111 404.1 279 68.5
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 9.1e-111 404.1 279 67.7
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.5e-110 403.3 283 68.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.0e-110 402.9 278 68.3
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.0e-110 402.9 281 68.0
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 5.9e-110 401.4 280 68.2
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.0e-109 400.6 281 66.5
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.7e-109 399.8 281 67.3
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 2.9e-109 399.1 287 66.6
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.8e-109 398.7 287 65.2
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.1e-108 397.1 284 66.9
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.4e-108 396.7 283 67.5
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.4e-108 396.7 278 68.3
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 4.2e-108 395.2 272 69.1
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 4.2e-108 395.2 245 75.1
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 9.4e-108 394.0 280 65.7
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.2e-107 393.7 282 67.0
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.7e-107 391.7 261 69.0
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.0e-106 390.6 231 76.6
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.3e-106 389.4 258 70.5
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 2.3e-106 389.4 245 72.2
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 3.9e-106 388.7 270 68.9
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 3.9e-106 388.7 278 67.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 5.1e-106 388.3 246 70.3
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.5e-105 386.7 216 78.2
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.5e-105 386.7 216 78.2
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 4.4e-105 385.2 253 69.6
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 5.7e-105 384.8 253 69.6
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 5.7e-105 384.8 277 65.7
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.4e-105 384.4 216 77.3
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 9.7e-105 384.0 264 67.0
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.3e-104 383.6 274 67.2
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.3e-104 383.6 216 78.2
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 2.2e-104 382.9 252 68.7
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 4.8e-104 381.7 245 70.2
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 6.3e-104 381.3 246 69.5
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 8.2e-104 380.9 263 67.7
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.4e-103 380.2 252 69.0
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.4e-103 380.2 275 65.1
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.4e-103 380.2 280 66.8
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 2.4e-103 379.4 246 69.1
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 9.1e-103 377.5 282 65.2
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.2e-102 377.1 311 61.1
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.5e-102 376.7 253 68.8
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.5e-102 376.7 251 70.5
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 2.6e-102 375.9 267 65.9
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 3.5e-102 375.6 216 75.5
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 7.7e-102 374.4 273 64.5
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.7e-101 373.2 263 65.4
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 2.9e-101 372.5 264 66.3
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.5e-100 370.2 271 63.8
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 9.4e-100 367.5 246 67.5
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 1.0e-98 364.0 203 79.3
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.4e-98 363.6 282 62.8
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 6.7e-98 361.3 282 62.8
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.1e-97 360.5 280 64.6
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 5.7e-97 358.2 275 61.5
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.7e-96 355.5 205 75.1
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.2e-94 350.5 262 63.4
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.3e-93 347.1 196 76.0
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.5e-92 343.6 277 61.4
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 2.2e-88 329.7 216 68.1
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 1.0e-85 320.9 204 70.6
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 3.2e-84 315.8 229 63.3
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 4.2e-84 315.5 278 57.9
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.4e-82 310.5 205 72.2
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.5e-76 289.7 209 68.9
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 5.7e-73 278.5 219 56.6
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 6.4e-72 275.0 278 49.3
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 7.0e-71 271.6 209 62.7
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.6e-70 270.4 254 52.4
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.7e-70 269.6 278 47.8
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.9e-69 265.8 144 81.9
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 4.3e-68 262.3 268 48.9
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 2.4e-63 246.5 203 52.2
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 9.2e-63 244.6 186 61.8
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-56 224.2 280 47.1
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 7.1e-55 218.4 216 50.0
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.3e-53 214.2 173 56.6
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.3e-52 209.5 176 61.4
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.7e-46 189.9 169 55.6
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 9.6e-44 181.4 150 63.3
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 5.3e-26 122.5 87 63.2
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.5e-25 120.9 141 50.4
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 2.2e-16 90.5 56 69.6
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.1e-12 78.2 123 39.8


User provided reference genes

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