Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G106400 Manihot esculenta HOM05D003936 ORTHO05D004747 1.1e-246 856.3 468 100.0
Potri.003G178800 Populus trichocarpa HOM05D003936 ORTHO05D004747 3.0e-111 406.4 443 58.0
Sabra03G0131100 Salix brachista HOM05D003936 ORTHO05D004747 4.1e-100 369.4 441 54.4
Cpa.g.sc10.123 Carica papaya HOM05D003936 ORTHO05D004747 7.0e-100 368.6 446 54.9
TWI12G0163 Tripterygium wilfordii HOM05D003936 ORTHO05D004747 4.5e-99 365.9 448 54.2
Duzib212G0318 Durio zibethinus HOM05D003936 ORTHO05D004747 5.5e-97 359.0 441 53.3
Prupe.3G095300 Prunus persica HOM05D003936 ORTHO05D004747 1.5e-94 350.9 439 52.6
Dinv23312 Davidia involucrata HOM05D003936 ORTHO05D004747 2.0e-94 350.5 442 53.2
QL05p034110 Quercus lobata HOM05D003936 ORTHO05D004747 4.9e-93 345.9 447 53.5
Actinidia25443 Actinidia chinensis HOM05D003936 ORTHO05D004747 2.7e-91 340.1 430 53.7
Cfa001907 Carpinus fangiana HOM05D003936 ORTHO05D004747 6.6e-90 335.5 449 52.1
CSS0006918 Camellia sinensis var. sinensis HOM05D003936 ORTHO05D004747 3.3e-89 333.2 456 49.1
MELO3C017854.2 Cucumis melo HOM05D003936 ORTHO05D004747 5.6e-89 332.4 441 51.2
Sed0026159 Sechium edule HOM05D003936 ORTHO05D004747 1.6e-88 330.9 449 49.9
Thecc.06G036500 Theobroma cacao HOM05D003936 ORTHO05D004747 1.6e-88 330.9 441 50.3
CsaV3_4G001790 Cucumis sativus L. HOM05D003936 ORTHO05D004747 2.3e-87 327.0 429 51.7
CiPaw.01G252100 Carya illinoinensis HOM05D003936 ORTHO05D004747 3.1e-87 326.6 453 51.4
Oeu029910.1 Olea europaea HOM05D003936 ORTHO05D004747 4.9e-85 319.3 408 52.0
TAR636G3155 Trochodendron aralioides HOM05D003936 ORTHO05D004747 2.4e-84 317.0 388 53.9
Gohir.D06G190700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 2.0e-83 313.9 442 49.8
Gorai.010G223800 Gossypium raimondii HOM05D003936 ORTHO05D004747 2.7e-83 313.5 442 49.8
Nn2g12258 Nelumbo nucifera HOM05D003936 ORTHO05D004747 2.7e-83 313.5 380 51.8
ClCG07G012350 Citrullus lanatus HOM05D003936 ORTHO05D004747 3.9e-82 309.7 514 44.7
Actinidia18230 Actinidia chinensis HOM05D003936 ORTHO05D004747 1.5e-81 307.8 433 51.0
Atru.chr10.2382 Acer truncatum HOM05D003936 ORTHO05D004747 5.6e-81 305.8 451 49.7
Ciclev10025627m.g Citrus clementina HOM05D003936 ORTHO05D004747 5.6e-81 305.8 453 46.6
Nitab4.5_0000114g0150 Nicotiana tabacum HOM05D003936 ORTHO05D004747 6.8e-79 298.9 390 50.3
Gohir.A06G183700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 7.5e-78 295.4 442 48.0
COL.COLO4_11826 Corchorus olitorius HOM05D003936 ORTHO05D004747 1.3e-77 294.7 585 40.7
MD17G1219800 Malus domestica HOM05D003936 ORTHO05D004747 1.7e-77 294.3 452 46.9
Lalb_Chr25g0279171 Lupinus albus HOM05D003936 ORTHO05D004747 3.5e-75 286.6 380 47.6
ATR0584G049 Amborella trichopoda HOM05D003936 ORTHO05D004747 6.0e-75 285.8 377 49.9
Sed0007390 Sechium edule HOM05D003936 ORTHO05D004747 3.3e-73 280.0 446 47.1
Eucgr.F03943 Eucalyptus grandis HOM05D003936 ORTHO05D004747 4.3e-73 279.6 454 44.5
THA.LOC104812450 Tarenaya hassleriana HOM05D003936 ORTHO05D004747 7.3e-73 278.9 452 46.0
Dinv30485 Davidia involucrata HOM05D003936 ORTHO05D004747 2.8e-72 276.9 438 46.3
MSTRG.11168 Avicennia marina HOM05D003936 ORTHO05D004747 4.7e-72 276.2 382 47.6
Sc10g0006130 Simmondsia chinensis HOM05D003936 ORTHO05D004747 8.1e-72 275.4 401 45.1
RcHm_v2.0_Chr2g0133511 Rosa chinensis HOM05D003936 ORTHO05D004747 5.8e-70 269.2 442 46.8
CANSAT11G1020 Cannabis sativa HOM05D003936 ORTHO05D004747 2.2e-69 267.3 433 44.1
Thhalv10018593m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 2.4e-68 263.8 446 43.0
Sopen08g002790 Solanum pennellii HOM05D003936 ORTHO05D004747 3.2e-68 263.5 345 48.4
Nitab4.5_0012293g0020 Nicotiana tabacum HOM05D003936 ORTHO05D004747 7.1e-68 262.3 317 51.7
arahy.Tifrunner.gnm1.ann1.17KRJ7 Arachis hypogaea HOM05D003936 ORTHO05D004747 9.2e-68 261.9 373 48.0
arahy.Tifrunner.gnm1.ann1.6RSI2J Arachis hypogaea HOM05D003936 ORTHO05D004747 9.2e-68 261.9 373 48.0
CDE02G1505 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 6.0e-67 259.2 374 44.1
Rhsim08G0208400 Rhododendron simsii HOM05D003936 ORTHO05D004747 5.1e-66 256.1 479 41.5
vmacro17364 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 8.6e-66 255.4 479 42.2
MBI14_g15650_MAGBIO Magnolia biondii HOM05D003936 ORTHO05D004747 1.9e-65 254.2 365 48.8
Aa31LG4G900 Aethionema arabicum HOM05D003936 ORTHO05D004747 2.5e-65 253.8 441 45.8
A07p45080 Brassica napus HOM05D003936 ORTHO05D004747 3.3e-65 253.4 442 42.3
Carub.0002s2693 Capsella rubella HOM05D003936 ORTHO05D004747 7.3e-65 252.3 439 43.7
BolC6t40405H Brassica oleracea HOM05D003936 ORTHO05D004747 1.2e-64 251.5 442 41.9
BraA07t32011Z Brassica rapa HOM05D003936 ORTHO05D004747 1.6e-64 251.1 442 41.4
Sp5g35150 Schrenkiella parvula HOM05D003936 ORTHO05D004747 6.2e-64 249.2 442 42.1
SGA_v2.0_scaffold5G02746 Striga asiatica HOM05D003936 ORTHO05D004747 8.1e-64 248.8 417 43.9
C06p53910 Brassica napus HOM05D003936 ORTHO05D004747 3.1e-63 246.9 442 40.7
Hma1.2p1_0135F.1_g061770 Hydrangea macrophylla HOM05D003936 ORTHO05D004747 4.0e-63 246.5 334 48.5
RcHm_v2.0_Chr4g0407691 Rosa chinensis HOM05D003936 ORTHO05D004747 3.4e-62 243.4 441 44.0
Thhalv10007635m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 4.4e-62 243.0 442 43.4
CARHR073900 Cardamine hirsuta HOM05D003936 ORTHO05D004747 7.6e-62 242.3 452 40.5
Solyc08g006840.3 Solanum lycopersicum HOM05D003936 ORTHO05D004747 2.2e-61 240.7 259 54.1
BcaC03g15942 Brassica carinata HOM05D003936 ORTHO05D004747 4.9e-61 239.6 441 40.1
BolC2t09719H Brassica oleracea HOM05D003936 ORTHO05D004747 4.9e-61 239.6 441 40.4
SHI11258 Sapria himalayana HOM05D003936 ORTHO05D004747 8.4e-61 238.8 453 44.2
PGR102G1525 Punica granatum HOM05D003936 ORTHO05D004747 1.1e-60 238.4 440 44.1
AT1G80620 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 1.9e-60 237.7 441 41.5
C02p37040 Brassica napus HOM05D003936 ORTHO05D004747 2.4e-60 237.3 437 40.3
FvH4_6g28960 Fragaria vesca HOM05D003936 ORTHO05D004747 3.2e-60 236.9 440 46.1
FAN02G3242 Fragaria x ananassa HOM05D003936 ORTHO05D004747 3.2e-60 236.9 451 45.5
Migut.I00724 Erythranthe guttata HOM05D003936 ORTHO05D004747 1.6e-59 234.6 379 41.2
CARHR016320 Cardamine hirsuta HOM05D003936 ORTHO05D004747 3.5e-59 233.4 439 40.8
AL1G27960 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 4.6e-59 233.0 451 39.9
FAN14G5707 Fragaria x ananassa HOM05D003936 ORTHO05D004747 4.6e-59 233.0 451 45.2
unitig_27.g24954 Utricularia gibba HOM05D003936 ORTHO05D004747 4.6e-59 233.0 385 42.9
FAN09G0504 Fragaria x ananassa HOM05D003936 ORTHO05D004747 7.8e-59 232.3 451 45.7
AL2G40830 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 1.7e-58 231.1 466 39.9
FAN05G1488 Fragaria x ananassa HOM05D003936 ORTHO05D004747 5.1e-58 229.6 454 45.2
Ca_29510_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 1.5e-57 228.0 448 40.8
BcaB05g25240 Brassica carinata HOM05D003936 ORTHO05D004747 2.5e-57 227.3 438 40.4
BraA02t07326Z Brassica rapa HOM05D003936 ORTHO05D004747 2.5e-57 227.3 435 39.5
Carub.0001s1560 Capsella rubella HOM05D003936 ORTHO05D004747 4.3e-57 226.5 438 42.2
Aqoxy7G03521 Aquilegia oxysepala HOM05D003936 ORTHO05D004747 7.3e-57 225.7 379 41.4
vmacro19035 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 1.6e-56 224.6 321 47.0
A02p23300 Brassica napus HOM05D003936 ORTHO05D004747 2.1e-56 224.2 435 38.6
Lj2A141T58 Lonicera japonica HOM05D003936 ORTHO05D004747 6.2e-56 222.6 380 43.9
A06p11880 Brassica napus HOM05D003936 ORTHO05D004747 1.1e-55 221.9 374 42.2
Sp1g14110 Schrenkiella parvula HOM05D003936 ORTHO05D004747 1.1e-55 221.9 442 42.1
C05p14060 Brassica napus HOM05D003936 ORTHO05D004747 9.0e-55 218.8 372 42.5
BraA06t24358Z Brassica rapa HOM05D003936 ORTHO05D004747 9.0e-55 218.8 379 42.2
BolC5t30137H Brassica oleracea HOM05D003936 ORTHO05D004747 1.2e-54 218.4 372 42.5
AT1G15810 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 1.3e-53 214.9 437 39.8
Lj3g0027357 Lotus japonicus HOM05D003936 ORTHO05D004747 8.4e-53 212.2 367 42.0
Hund00590 Selenicereus undatus HOM05D003936 ORTHO05D004747 4.2e-52 209.9 388 40.5
PSO210G7358 Papaver somniferum HOM05D003936 ORTHO05D004747 7.1e-52 209.1 328 45.7
VMungo0331G1494 Vigna mungo HOM05D003936 ORTHO05D004747 9.3e-52 208.8 325 43.1
PSO478G0782 Papaver somniferum HOM05D003936 ORTHO05D004747 1.6e-51 208.0 322 45.0
AUR62011450 Chenopodium quinoa HOM05D003936 ORTHO05D004747 2.7e-51 207.2 394 40.4
FAN05G0608 Fragaria x ananassa HOM05D003936 ORTHO05D004747 3.5e-51 206.8 443 44.0
Phvul.010G158900 Phaseolus vulgaris HOM05D003936 ORTHO05D004747 3.5e-51 206.8 371 42.3
BraA09t41490Z Brassica rapa HOM05D003936 ORTHO05D004747 4.6e-51 206.5 331 42.6
Lj9A496T67 Lonicera japonica HOM05D003936 ORTHO05D004747 4.6e-51 206.5 338 44.4
A09p61160 Brassica napus HOM05D003936 ORTHO05D004747 6.0e-51 206.1 331 42.6
BcaC07g41479 Brassica carinata HOM05D003936 ORTHO05D004747 7.9e-51 205.7 317 43.5
ECA232G5052 Erigeron canadensis HOM05D003936 ORTHO05D004747 1.7e-50 204.5 321 45.8
C08p44760 Brassica napus HOM05D003936 ORTHO05D004747 2.3e-50 204.1 335 42.4
Medtr4g009100 Medicago truncatula HOM05D003936 ORTHO05D004747 3.0e-50 203.8 377 40.8
TPR.G29720 Trifolium pratense HOM05D003936 ORTHO05D004747 3.0e-50 203.8 396 39.4
Lsat_1_v5_gn_8_9281 Lactuca sativa HOM05D003936 ORTHO05D004747 5.1e-50 203.0 367 42.8
Psat7g258560 Pisum sativum HOM05D003936 ORTHO05D004747 6.6e-50 202.6 371 42.3
arahy.Tifrunner.gnm1.ann1.ZV9XE5 Arachis hypogaea HOM05D003936 ORTHO05D004747 1.1e-49 201.8 327 43.1
Glyma.07G026400 Glycine max HOM05D003936 ORTHO05D004747 1.9e-49 201.1 374 38.5
BolC8t52022H Brassica oleracea HOM05D003936 ORTHO05D004747 3.3e-49 200.3 335 43.0
HPP92_027846 Vanilla planifolia HOM05D003936 ORTHO05D004747 1.6e-48 198.0 382 42.7
EL10Ac9g21843 Beta vulgaris HOM05D003936 ORTHO05D004747 2.1e-48 197.6 397 39.3
PSO782G4560 Papaver somniferum HOM05D003936 ORTHO05D004747 2.1e-48 197.6 328 43.9
Peaxi162Scf00045g02127 Petunia axillaris HOM05D003936 ORTHO05D004747 2.1e-48 197.6 313 43.1
AUR62016607 Chenopodium quinoa HOM05D003936 ORTHO05D004747 2.8e-48 197.2 394 40.1
arahy.Tifrunner.gnm1.ann1.9YJ9LX Arachis hypogaea HOM05D003936 ORTHO05D004747 1.1e-47 195.3 326 42.3
DCAR_016286 Daucus carota HOM05D003936 ORTHO05D004747 7.6e-46 189.1 385 38.2
QL08p064447 Quercus lobata HOM05D003936 ORTHO05D004747 9.9e-46 188.7 356 43.5
Cc04_g04830 Coffea canephora HOM05D003936 ORTHO05D004747 5.5e-44 183.0 221 51.1
SEGI_32691 Sequoiadendron giganteum HOM05D003936 ORTHO05D004747 1.0e-42 178.7 374 37.4
MD09G1223400 Malus domestica HOM05D003936 ORTHO05D004747 6.7e-42 176.0 172 56.4
HanXRQChr16g0500031 Helianthus annuus HOM05D003936 ORTHO05D004747 7.4e-41 172.6 277 43.7
CiPaw.02G160600 Carya illinoinensis HOM05D003936 ORTHO05D004747 1.5e-38 164.9 372 39.0
SalBow6G1756 Salvia bowleyana HOM05D003936 ORTHO05D004747 2.9e-37 160.6 454 33.0
SalBow6G6295 Salvia bowleyana HOM05D003936 ORTHO05D004747 2.9e-37 160.6 454 33.0
Os02g0803200 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 6.5e-37 159.5 375 35.7
RcHm_v2.0_Chr6g0246971 Rosa chinensis HOM05D003936 ORTHO05D004747 5.1e-34 149.8 225 48.0
GSVIVG01026722001 Vitis vinifera HOM05D003936 ORTHO05D004747 3.3e-33 147.1 94 77.7
Ah.02g127880 Amaranthus hybridus HOM05D003936 ORTHO05D004747 8.2e-32 142.5 415 32.5
Zm00001eb192140 Zea mays HOM05D003936 ORTHO05D004747 9.0e-31 139.0 371 35.6
Zm00001eb320360 Zea mays HOM05D003936 ORTHO05D004747 9.0e-31 139.0 380 32.4
CDE09G0364 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 1.8e-26 124.8 262 35.5
AL1040U10010 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 9.7e-25 119.0 69 88.4
Os06g0176150 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 5.9e-22 109.8 86 65.1
Os06g0177250 Oryza sativa ssp. japonica HOM05D003936 ORTHO05D004747 5.9e-22 109.8 86 65.1
QL08p064442 Quercus lobata HOM05D003936 ORTHO05D004747 7.2e-20 102.8 57 91.2
Ca_25898_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 6.1e-19 99.8 365 32.1
PSO832G3729 Papaver somniferum HOM05D003936 ORTHO05D004747 1.0e-18 99.0 59 83.1
RcHm_v2.0_Chr2g0145231 Rosa chinensis HOM05D003936 ORTHO05D004747 5.7e-17 93.2 75 72.0
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 6.3e-16 89.7 96 49.0
CDE09G1350 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 5.3e-15 86.7 51 88.2
Pp3c1_21620 Physcomitrium patens HOM05D003936 ORTHO05D004747 1.0e-13 82.4 97 45.4
AagrBONN_evm.TU.Sc2ySwM_117.728 Anthoceros agrestis HOM05D003936 ORTHO05D004747 7.2e-12 76.3 78 50.0
SMO164G0146 Selaginella moellendorffii HOM05D003936 ORTHO05D004747 1.4e-10 72.0 160 37.5
Cfa001908 Carpinus fangiana HOM05D003936 ORTHO05D004747 2.0e-09 68.2 243 30.9
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 7.0e-07 59.7 65 50.8
TWI18G1152 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.7e-06 56.2 100 38.0


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