Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G092250 Manihot esculenta HOM05D009379 ORTHO05D010815 1.9e-54 215.7 115 100.0
Manes.11G077600 Manihot esculenta HOM05D009379 ORTHO05D010815 1.5e-32 142.9 107 73.8
Potri.017G060400 Populus trichocarpa HOM05D010918 ORTHO05D010815 5.0e-23 111.3 90 65.6
Thecc.04G045800 Theobroma cacao HOM05D010918 ORTHO05D010815 4.6e-21 104.8 116 56.0
Cfa007173 Carpinus fangiana HOM05D010918 ORTHO05D010815 3.9e-20 101.7 114 53.5
QL02p069882 Quercus lobata HOM05D010918 ORTHO05D010815 3.3e-19 98.6 115 53.0
Sabra17G0054200 Salix brachista HOM05D001116 ORTHO05D001028 1.6e-18 96.3 92 63.0
COL.COLO4_13348 Corchorus olitorius HOM05D010918 ORTHO05D010815 2.2e-18 95.9 116 50.9
Haze_14937 Corylus avellana HOM05D000001 ORTHO05D000003 1.8e-17 92.8 92 60.9
Duzib147G1198 Durio zibethinus HOM05D010918 ORTHO05D010815 9.0e-17 90.5 116 50.0
CiPaw.03G003100 Carya illinoinensis HOM05D009379 ORTHO05D010815 5.9e-16 87.8 96 49.0
THA.LOC104805305 Tarenaya hassleriana HOM05D009379 ORTHO05D010815 3.0e-12 75.5 84 48.8
AL1G24490 Arabidopsis lyrata HOM05D009379 ORTHO05D010815 3.9e-12 75.1 79 50.6
AT1G12845 Arabidopsis thaliana HOM05D009379 ORTHO05D010815 3.9e-12 75.1 99 45.5
RcHm_v2.0_Chr2g0176391 Rosa chinensis HOM05D010918 ORTHO05D010815 6.7e-12 74.3 118 47.5
Phvul.001G086200 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 1.5e-11 73.2 97 47.4
CARHR013170 Cardamine hirsuta HOM05D009379 ORTHO05D010815 2.5e-11 72.4 93 49.5
Lalb_Chr24g0403191 Lupinus albus HOM05D009379 ORTHO05D010815 2.5e-11 72.4 85 48.2
Gohir.D10G079900 Gossypium hirsutum HOM05D010918 ORTHO05D010815 4.3e-11 71.6 101 47.5
Carub.0001s1259 Capsella rubella HOM05D009379 ORTHO05D010815 5.7e-11 71.2 79 48.1
Gohir.A10G071200 Gossypium hirsutum HOM05D010918 ORTHO05D010815 7.4e-11 70.9 101 48.5
Gorai.011G087000 Gossypium raimondii HOM05D010918 ORTHO05D010815 1.3e-10 70.1 113 45.1
C08p15710 Brassica napus HOM05D009379 ORTHO05D010815 1.7e-10 69.7 105 45.7
FAN05G3850 Fragaria x ananassa HOM05D010918 ORTHO05D010815 1.7e-10 69.7 116 48.3
FAN14G2957 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.7e-10 69.7 99 51.5
TAR371G1162 Trochodendron aralioides HOM05D010918 ORTHO05D010815 1.7e-10 69.7 109 41.3
Glyma.19G101500 Glycine max HOM05D009379 ORTHO05D010815 2.8e-10 68.9 94 52.1
Phvul.004G070400 Phaseolus vulgaris HOM05D009379 ORTHO05D010815 2.8e-10 68.9 90 51.1
BolC8t49198H Brassica oleracea HOM05D009379 ORTHO05D010815 3.7e-10 68.6 94 45.7
Glyma.16G049700 Glycine max HOM05D009379 ORTHO05D010815 3.7e-10 68.6 95 49.5
Rhsim10G0001800 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.3e-10 67.8 102 46.1
A08p32580 Brassica napus HOM05D009379 ORTHO05D010815 8.2e-10 67.4 94 45.7
Cpa.g.sc70.79 Carica papaya HOM05D010918 ORTHO05D010815 8.2e-10 67.4 83 53.0
VMungo1383G0128 Vigna mungo HOM05D009379 ORTHO05D010815 1.1e-09 67.0 89 51.7
Thhalv10010043m.g Eutrema salsugineum HOM05D009379 ORTHO05D010815 2.4e-09 65.9 103 41.7
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 3.1e-09 65.5 85 49.4
BcaC05g25109 Brassica carinata HOM05D009379 ORTHO05D010815 4.1e-09 65.1 103 42.7
A06p08820 Brassica napus HOM05D009379 ORTHO05D010815 1.2e-08 63.5 104 43.3
BraA06t24077Z Brassica rapa HOM05D009379 ORTHO05D010815 1.2e-08 63.5 104 43.3
BraA08t35182Z Brassica rapa HOM05D009379 ORTHO05D010815 1.5e-08 63.2 97 43.3
TPR.G17456 Trifolium pratense HOM05D009379 ORTHO05D010815 2.0e-08 62.8 94 51.1
Glyma.16G146800 Glycine max HOM05D009379 ORTHO05D010815 1.3e-07 60.1 92 45.7
MD09G1004200 Malus domestica HOM05D010918 ORTHO05D010815 2.9e-07 58.9 92 45.7
Nn3g16306 Nelumbo nucifera HOM05D010918 ORTHO05D048567 8.5e-07 57.4 109 43.1
BcaC05g25149 Brassica carinata HOM05D009379 ORTHO05D010815 1.9e-06 56.2 95 42.1
C05p10430 Brassica napus HOM05D009379 ORTHO05D010815 1.9e-06 56.2 95 42.1
CANSAT64G1478 Cannabis sativa HOM05D010918 ORTHO05D010815 2.5e-06 55.8 102 41.2
Sed0007104 Sechium edule HOM05D010918 ORTHO05D010815 5.5e-06 54.7 113 38.9
Medtr7g083830 Medicago truncatula HOM05D009379 ORTHO05D010815 9.4e-06 53.9 82 41.5


User provided reference genes

Program Settings