Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 5.9e-46 187.2 95 100.0
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 3.1e-31 138.3 92 76.1
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 4.8e-24 114.4 93 65.6
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 1.6e-22 109.4 94 64.9
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 2.2e-21 105.5 91 63.7
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 2.9e-21 105.1 93 61.3
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 8.5e-21 103.6 92 63.0
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.9e-20 102.4 91 62.6
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 5.5e-20 100.9 93 59.1
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 1.2e-19 99.8 91 57.1
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.6e-19 99.4 91 61.5
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 3.6e-19 98.2 93 58.1
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 4.7e-19 97.8 91 59.3
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 6.1e-19 97.4 88 62.5
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 8.0e-19 97.1 88 61.4
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 1.0e-18 96.7 92 56.5
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 2.3e-18 95.5 93 64.5
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 3.0e-18 95.1 90 56.7
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 3.0e-18 95.1 90 55.6
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 4.0e-18 94.7 93 61.3
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.0e-18 94.7 93 61.3
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.0e-18 94.7 88 60.2
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 5.2e-18 94.4 92 55.4
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.2e-18 94.4 93 61.3
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 5.2e-18 94.4 90 57.8
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 8.8e-18 93.6 86 58.1
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 8.8e-18 93.6 93 60.2
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 8.8e-18 93.6 90 55.6
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.2e-17 93.2 92 60.9
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.2e-17 93.2 93 54.8
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 1.5e-17 92.8 92 55.4
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 2.0e-17 92.4 93 60.2
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 2.0e-17 92.4 93 57.0
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.6e-17 92.0 91 52.7
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.6e-17 92.0 92 57.6
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 3.4e-17 91.7 90 55.6
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 4.4e-17 91.3 91 56.0
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 7.5e-17 90.5 92 57.6
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 9.8e-17 90.1 91 51.6
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 2.2e-16 89.0 91 57.1
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 3.7e-16 88.2 94 53.2
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 6.3e-16 87.4 93 54.8
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 6.3e-16 87.4 92 53.3
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 2.4e-15 85.5 90 54.4
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 3.1e-15 85.1 91 54.9
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 4.1e-15 84.7 91 52.7
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 4.1e-15 84.7 90 52.2
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 9.1e-15 83.6 92 50.0
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.6e-14 82.8 92 52.2
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 2.0e-14 82.4 92 51.1
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.0e-14 82.4 91 49.5
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 3.5e-14 81.6 86 52.3
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.7e-13 79.3 91 51.6
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 3.8e-13 78.2 97 48.5
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 5.0e-13 77.8 92 48.9
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 6.5e-13 77.4 91 49.5
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 6.5e-13 77.4 92 48.9
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 1.9e-12 75.9 90 50.0
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 3.2e-12 75.1 96 44.8
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 3.2e-12 75.1 95 43.2
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 3.2e-12 75.1 88 45.5
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 3.2e-12 75.1 92 50.0
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 4.2e-12 74.7 91 53.8
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 5.5e-12 74.3 89 43.8
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 1.6e-11 72.8 93 46.2
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 2.1e-11 72.4 90 48.9
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 3.6e-11 71.6 44 75.0
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.6e-11 71.6 61 60.7
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 3.6e-11 71.6 95 44.2
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 4.7e-11 71.2 100 42.0
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 4.7e-11 71.2 90 46.7
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 8.0e-11 70.5 100 43.0
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 8.0e-11 70.5 93 46.2
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 1.0e-10 70.1 95 42.1
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.4e-10 69.7 59 62.7
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 1.4e-10 69.7 70 54.3
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.4e-10 69.7 48 70.8
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.3e-10 68.9 61 60.7
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 3.0e-10 68.6 95 46.3
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 5.2e-10 67.8 91 44.0
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 5.2e-10 67.8 91 50.5
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 5.2e-10 67.8 94 46.8
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 5.2e-10 67.8 93 47.3
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 8.8e-10 67.0 84 51.2
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 1.2e-09 66.6 83 50.6
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 1.5e-09 66.2 91 47.3
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 5.7e-09 64.3 90 48.9
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.7e-08 62.8 95 37.9
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 1.8e-07 59.3 91 39.6
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 5.4e-07 57.8 90 40.0
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 7.0e-07 57.4 68 48.5
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 7.0e-07 57.4 93 40.9
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 9.2e-07 57.0 37 59.5
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 1.6e-06 56.2 89 38.2
HPP92_017191 Vanilla planifolia HOM05D006691 ORTHO05D007620 2.7e-06 55.5 59 45.8
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 7.8e-06 53.9 91 36.3
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 7.8e-06 53.9 49 46.9


User provided reference genes

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