Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 3.2e-289 997.7 491 100.0
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 9.2e-228 793.5 491 80.2
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 6.6e-226 787.3 488 80.9
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 6.9e-223 777.3 496 79.0
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.6e-222 775.4 486 78.8
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.7e-221 772.7 487 77.4
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 4.9e-221 771.2 512 76.2
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 2.4e-220 768.8 487 78.2
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 3.2e-220 768.5 438 84.7
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 9.3e-220 766.9 487 78.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 6.0e-219 764.2 512 75.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 7.8e-219 763.8 487 77.6
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 2.1e-216 755.7 469 77.8
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 2.1e-216 755.7 444 82.7
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 3.6e-216 755.0 498 75.5
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 2.4e-215 752.3 529 72.2
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 5.8e-214 747.7 461 78.5
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.3e-213 746.5 444 81.5
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.7e-213 746.1 460 78.5
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.2e-213 745.7 492 76.0
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.9e-213 745.3 491 76.0
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.9e-212 742.7 490 75.5
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 4.2e-212 741.5 492 75.4
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.4e-212 741.1 487 76.6
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 2.3e-210 735.7 447 79.6
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 5.1e-210 734.6 441 81.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.1e-209 733.4 460 78.5
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.9e-209 732.6 474 77.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.5e-209 732.3 423 82.5
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 4.3e-209 731.5 429 80.4
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 7.4e-209 730.7 447 79.2
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.3e-208 729.9 431 81.7
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 3.7e-208 728.4 426 82.6
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 4.8e-208 728.0 506 70.9
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.4e-207 726.5 486 74.9
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 4.0e-207 724.9 444 78.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 2.0e-206 722.6 428 80.8
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.0e-206 722.6 438 80.4
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 3.4e-206 721.8 493 72.6
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.3e-205 719.9 419 81.9
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 3.8e-205 718.4 425 80.5
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 6.4e-205 717.6 423 82.0
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.9e-204 716.1 487 72.1
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 2.5e-204 715.7 435 79.3
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 6.0e-203 711.1 494 71.3
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.8e-202 709.5 447 77.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.3e-202 709.1 420 79.8
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 6.7e-202 707.6 424 78.5
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.1e-200 702.6 444 77.7
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 2.8e-200 702.2 486 73.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.8e-200 702.2 564 65.2
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 8.2e-200 700.7 423 79.2
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.1e-199 700.3 428 79.2
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.1e-199 700.3 421 79.8
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.4e-199 699.9 469 72.3
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.4e-199 699.1 421 79.1
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 3.1e-199 698.7 423 78.5
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.0e-199 698.4 424 78.1
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 5.3e-199 698.0 422 78.4
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 6.9e-199 697.6 438 76.3
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.2e-198 696.8 424 77.8
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.2e-198 696.8 422 78.7
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 5.8e-198 694.5 424 77.6
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 6.5e-197 691.0 493 71.6
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 3.0e-194 682.2 387 85.5
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 7.4e-193 677.6 441 75.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.2e-190 670.2 381 84.3
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 4.5e-190 668.3 384 83.9
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 2.5e-188 662.5 380 83.9
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.8e-186 656.4 443 74.3
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 3.9e-186 655.2 497 67.8
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 6.3e-184 647.9 384 80.2
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.2e-182 643.7 440 75.2
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 3.4e-182 642.1 386 79.5
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.7e-181 639.8 472 68.0
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 4.2e-180 635.2 380 78.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 5.7e-177 624.8 419 73.0
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.7e-176 623.2 428 71.0
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 2.6e-174 615.9 339 86.7
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.5e-172 609.4 435 70.1
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.2e-171 607.1 422 71.8
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.6e-171 606.7 382 75.9
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 6.7e-170 601.3 488 64.3
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 2.6e-166 589.3 423 69.5
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 3.1e-159 565.8 403 69.2
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.0e-158 563.1 353 77.3
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 5.0e-157 558.5 419 64.0
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.8e-154 550.1 472 58.1
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 4.7e-147 525.4 326 75.5
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.8e-146 523.5 321 78.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 8.9e-138 494.6 424 60.4
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 2.6e-129 466.5 420 57.6
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.1e-119 434.5 263 76.4
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.1e-116 424.5 463 49.2
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.5e-105 387.5 246 74.0
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 6.6e-101 372.1 319 62.7
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.5e-100 370.2 319 62.7
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 3.6e-99 366.3 438 46.1
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 4.9e-96 355.9 202 81.2
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 4.2e-87 326.2 262 59.9
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 6.0e-86 322.4 226 73.5
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 3.4e-73 280.0 211 67.8
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 8.8e-69 265.4 319 51.1
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.1e-68 265.0 179 73.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 1.8e-61 241.1 165 71.5
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.6e-60 237.3 439 38.3
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 8.0e-38 162.5 109 66.1
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 8.8e-37 159.1 93 81.7
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.6e-33 148.3 89 83.1
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.9e-31 141.4 89 77.5
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 5.4e-18 96.7 58 74.1
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 1.2e-12 79.0 42 90.5
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.3e-07 60.8 108 37.0


User provided reference genes

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