Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G083301 Manihot esculenta HOM05D009450 ORTHO05D011174 1.8e-108 396.0 206 100.0
QL11p046425 Quercus lobata HOM05D009450 ORTHO05D011174 6.1e-48 194.9 190 57.4
Thecc.02G075000 Theobroma cacao HOM05D009450 ORTHO05D011174 5.2e-39 165.2 195 49.2
Duzib248G0816 Durio zibethinus HOM05D009450 ORTHO05D011174 3.4e-38 162.5 171 53.2
COL.COLO4_26046 Corchorus olitorius HOM05D009450 ORTHO05D011174 2.8e-37 159.5 170 53.5
Atru.chr5.3144 Acer truncatum HOM05D009450 ORTHO05D011174 9.1e-36 154.5 216 43.1
Gohir.A12G041000 Gossypium hirsutum HOM05D009450 ORTHO05D011174 3.3e-33 146.0 172 49.4
Gohir.D12G031400 Gossypium hirsutum HOM05D009450 ORTHO05D011174 7.2e-33 144.8 175 50.9
Gorai.008G032100 Gossypium raimondii HOM05D009450 ORTHO05D011174 7.2e-33 144.8 175 50.9
Haze_02239 Corylus avellana HOM05D009450 ORTHO05D011174 2.8e-32 142.9 202 45.5
Manes.11G081800 Manihot esculenta HOM05D009450 ORTHO05D011174 2.8e-32 142.9 99 75.8
Duzib132G1012 Durio zibethinus HOM05D009450 ORTHO05D011174 8.9e-31 137.9 155 51.6
Prupe.8G083800 Prunus persica HOM05D009450 ORTHO05D011174 4.4e-30 135.6 195 43.6
Cfa005112 Carpinus fangiana HOM05D009450 ORTHO05D011174 1.4e-28 130.6 190 43.7
CANSAT11G1720 Cannabis sativa HOM05D009450 ORTHO05D011174 1.6e-27 127.1 200 40.5
RcHm_v2.0_Chr6g0267941 Rosa chinensis HOM05D009450 ORTHO05D011174 1.6e-27 127.1 184 42.4
MD10G1063000 Malus domestica HOM05D009450 ORTHO05D011174 7.3e-25 118.2 178 39.3
FAN20G2733 Fragaria x ananassa HOM05D009450 ORTHO05D011174 1.7e-21 107.1 184 37.5
FAN15G1529 Fragaria x ananassa HOM05D009450 ORTHO05D011174 4.9e-21 105.5 184 36.4
Potri.004G163032 Populus trichocarpa HOM05D009450 ORTHO05D011174 1.1e-20 104.4 119 53.8
FAN24G1306 Fragaria x ananassa HOM05D009450 ORTHO05D011174 1.8e-20 103.6 184 37.5
FvH4_2g10440 Fragaria vesca HOM05D009450 ORTHO05D011174 5.4e-20 102.1 184 37.0
FAN27G1168 Fragaria x ananassa HOM05D009450 ORTHO05D011174 5.4e-20 102.1 184 35.9
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 5.0e-18 95.5 172 32.0
Sabra04G0109300 Salix brachista HOM05D000240 ORTHO05D001140 6.6e-18 95.1 97 58.8
AUR62016831 Chenopodium quinoa HOM05D024381 ORTHO05D011174 1.5e-17 94.0 180 32.8
AUR62010387 Chenopodium quinoa HOM05D024381 ORTHO05D011174 7.3e-17 91.7 178 32.6
MD05G1055700 Malus domestica HOM05D009450 ORTHO05D011174 9.5e-17 91.3 180 34.4
Sc18g0005370 Simmondsia chinensis HOM05D024381 ORTHO05D011174 5.8e-14 82.0 174 29.9
Psat5g003880 Pisum sativum HOM05D009450 ORTHO05D011174 1.7e-13 80.5 81 51.9
Lj1g0006878 Lotus japonicus HOM05D009450 ORTHO05D011174 2.2e-13 80.1 90 48.9
Ca_15333_v3 Cicer arietinum L. HOM05D009450 ORTHO05D011174 4.9e-13 79.0 85 45.9
TPR.G15487 Trifolium pratense HOM05D009450 ORTHO05D011174 1.2e-11 74.3 91 45.1
Phvul.009G002800 Phaseolus vulgaris HOM05D009450 ORTHO05D011174 1.6e-11 73.9 88 46.6
Medtr3g117560 Medicago truncatula HOM05D009450 ORTHO05D011174 4.6e-11 72.4 82 45.1
Glyma.06G007800 Glycine max HOM05D009450 ORTHO05D011174 6.2e-08 62.0 89 43.8
QL11p046455 Quercus lobata HOM05D044784 ORTHO05D011174 5.2e-07 58.9 103 35.9
QL11p046429 Quercus lobata HOM05D044784 ORTHO05D337806 6.8e-07 58.5 85 40.0


User provided reference genes

Program Settings