Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 1.2e-42 176.0 87 100.0
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 8.9e-33 143.3 89 83.1
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 1.7e-28 129.0 87 77.0
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.3e-28 128.6 91 73.6
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 3.9e-28 127.9 84 75.0
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 3.9e-28 127.9 87 73.6
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 3.9e-28 127.9 92 72.8
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 6.6e-28 127.1 89 71.9
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 2.5e-27 125.2 84 70.2
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 3.3e-27 124.8 86 75.6
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 3.3e-27 124.8 88 72.7
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.3e-27 124.8 89 71.9
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.3e-27 124.8 84 72.6
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.3e-27 124.4 89 69.7
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 5.6e-27 124.0 93 67.7
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.2e-26 122.9 87 71.3
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.2e-26 122.9 87 74.7
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.1e-26 122.1 85 75.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 2.8e-26 121.7 83 71.1
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.8e-26 121.7 95 65.3
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 3.6e-26 121.3 87 77.0
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 3.6e-26 121.3 90 71.1
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 4.7e-26 120.9 91 67.0
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.7e-26 120.9 89 70.8
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.4e-25 119.4 99 63.6
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.3e-25 118.6 83 69.9
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 5.2e-25 117.5 90 66.7
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.2e-25 117.5 90 66.7
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 5.2e-25 117.5 94 63.8
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 6.8e-25 117.1 90 70.0
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.8e-25 117.1 89 69.7
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 8.9e-25 116.7 89 67.4
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 8.9e-25 116.7 89 67.4
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.2e-24 116.3 99 61.6
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.5e-24 115.9 85 70.6
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-24 115.9 90 66.7
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.5e-24 115.9 89 68.5
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 2.0e-24 115.5 93 62.4
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 2.0e-24 115.5 100 59.0
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 3.4e-24 114.8 92 68.5
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 3.4e-24 114.8 84 69.0
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 3.4e-24 114.8 84 69.0
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 5.8e-24 114.0 92 65.2
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 5.8e-24 114.0 97 60.8
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 7.5e-24 113.6 92 64.1
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 9.9e-24 113.2 91 67.0
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.7e-23 112.5 95 62.1
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 2.9e-23 111.7 88 68.2
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 3.7e-23 111.3 100 58.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 84 65.5
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.4e-22 109.4 93 63.4
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.9e-22 109.0 93 62.4
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.9e-22 109.0 85 68.2
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 2.4e-22 108.6 87 63.2
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 2.4e-22 108.6 86 65.1
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 3.2e-22 108.2 96 62.5
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 3.2e-22 108.2 82 67.1
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 4.1e-22 107.8 86 68.6
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 5.4e-22 107.5 82 70.7
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 5.4e-22 107.5 95 60.0
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 5.4e-22 107.5 81 67.9
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 7.1e-22 107.1 94 59.6
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 9.2e-22 106.7 96 61.5
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.2e-21 106.3 90 63.3
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.6e-21 105.9 85 64.7
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.6e-21 105.9 96 61.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 4.6e-21 104.4 96 57.3
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 4.6e-21 104.4 88 63.6
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 4.6e-21 104.4 83 63.9
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 6.0e-21 104.0 92 62.0
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 7.8e-21 103.6 96 60.4
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.3e-20 102.8 71 71.8
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.3e-20 102.8 84 64.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.7e-20 102.4 95 57.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 2.3e-20 102.1 95 57.9
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 2.3e-20 102.1 92 59.8
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 2.3e-20 102.1 95 57.9
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 3.9e-20 101.3 77 70.1
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 6.6e-20 100.5 87 60.9
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 8.6e-20 100.1 87 62.1
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 1.1e-19 99.8 97 55.7
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 1.1e-19 99.8 97 55.7
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 1.5e-19 99.4 72 70.8
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.5e-19 99.4 76 71.1
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.3e-19 97.8 92 56.5
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.3e-19 97.8 92 56.5
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 5.6e-19 97.4 76 67.1
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 5.6e-19 97.4 54 83.3
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 5.6e-19 97.4 57 75.4
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.8e-18 95.1 76 67.1
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 4.7e-18 94.4 77 66.2
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.2e-18 94.0 78 64.1
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 6.2e-18 94.0 72 66.7
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 8.1e-18 93.6 72 68.1
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 8.1e-18 93.6 88 58.0
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 5.2e-17 90.9 99 51.5
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 3.4e-16 88.2 80 60.0
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 4.4e-16 87.8 71 66.2
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 2.9e-15 85.1 81 58.0
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 4.2e-14 81.3 75 56.0
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.6e-13 79.3 72 61.1
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.6e-13 79.3 44 86.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 2.1e-13 79.0 57 70.2
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 2.7e-13 78.6 82 50.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 6.0e-13 77.4 76 55.3
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.3e-12 76.3 73 60.3
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.3e-12 75.5 50 78.0
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 3.3e-11 71.6 41 73.2
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 3.3e-11 71.6 66 54.5
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.9e-07 57.8 44 68.2
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.9e-07 57.8 44 68.2


User provided reference genes

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