Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 2.2e-80 302.4 165 100.0
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.1e-44 183.7 154 70.8
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 9.5e-44 180.6 159 70.4
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 9.5e-44 180.6 171 65.5
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 3.6e-43 178.7 130 73.1
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.6e-43 178.7 159 69.8
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 3.6e-43 178.7 159 69.8
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 6.2e-43 177.9 171 64.9
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 4.0e-42 175.3 159 67.3
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.2e-41 173.7 154 68.2
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 6.4e-40 167.9 168 63.7
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.1e-39 167.2 168 63.7
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 3.5e-38 162.2 147 66.0
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 6.0e-38 161.4 169 59.8
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 7.8e-38 161.0 163 65.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 3.0e-37 159.1 174 64.4
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 6.6e-37 157.9 152 59.2
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 2.5e-36 156.0 111 69.4
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 5.6e-36 154.8 148 59.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 5.6e-36 154.8 162 62.3
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 1.6e-35 153.3 162 61.7
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.6e-35 153.3 163 63.2
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 3.6e-35 152.1 156 59.0
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 3.6e-35 152.1 156 59.0
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 4.7e-35 151.8 129 71.3
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 1.4e-34 150.2 129 69.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 2.4e-34 149.4 153 55.6
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 5.2e-34 148.3 124 70.2
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 5.8e-33 144.8 98 71.4
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 9.9e-33 144.1 166 60.2
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 1.3e-32 143.7 166 60.2
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 2.9e-32 142.5 142 58.5
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 3.8e-32 142.1 172 56.4
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 3.8e-32 142.1 142 58.5
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 4.9e-32 141.7 111 64.9
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 4.9e-32 141.7 168 58.9
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.4e-31 140.2 137 59.1
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 2.4e-31 139.4 175 60.0
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 4.2e-31 138.7 168 59.5
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 4.2e-31 138.7 159 61.0
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 5.4e-31 138.3 169 58.6
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 1.6e-30 136.7 166 60.2
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 2.7e-30 136.0 166 58.4
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 3.5e-30 135.6 160 58.8
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 4.6e-30 135.2 174 52.9
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 6.0e-30 134.8 163 58.3
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 7.8e-30 134.4 141 56.0
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 1.3e-29 133.7 97 74.2
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 1.3e-29 133.7 124 60.5
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 1.3e-29 133.7 149 54.4
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 1.7e-29 133.3 105 66.7
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 1.7e-29 133.3 99 77.8
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 3.0e-29 132.5 160 56.2
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 3.0e-29 132.5 150 57.3
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 3.0e-29 132.5 165 53.3
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 5.1e-29 131.7 164 53.0
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 6.6e-29 131.3 169 57.4
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 1.1e-28 130.6 169 51.5
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 3.3e-28 129.0 159 56.0
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 7.3e-28 127.9 156 57.1
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 9.6e-28 127.5 166 56.0
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.3e-27 127.1 150 58.0
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 1.6e-27 126.7 157 50.3
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 3.6e-27 125.6 90 76.7
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 6.2e-27 124.8 151 57.0
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 6.2e-27 124.8 84 77.4
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.4e-26 123.6 114 64.0
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.8e-26 123.2 123 61.8
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.8e-26 123.2 123 61.8
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.8e-26 123.2 123 61.8
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.8e-26 123.2 123 61.8
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 1.8e-26 123.2 161 55.3
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 2.4e-26 122.9 114 62.3
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 2.4e-26 122.9 205 39.0
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 5.3e-26 121.7 150 56.7
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 9.0e-26 120.9 149 57.0
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 2.0e-25 119.8 149 57.0
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 2.0e-25 119.8 158 54.4
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 7.6e-25 117.9 155 45.8
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 9.9e-25 117.5 168 53.0
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 3.8e-24 115.5 148 50.0
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 1.1e-23 114.0 157 54.8
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 2.1e-22 109.8 165 50.3
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 3.5e-22 109.0 165 50.3
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 6.0e-22 108.2 84 64.3
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 7.9e-22 107.8 95 69.5
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.3e-19 100.5 84 70.2
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.6e-19 100.1 84 70.2
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 9.0e-18 94.4 163 49.7
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 3.8e-16 89.0 106 53.8
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 3.8e-16 89.0 41 87.8
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 2.7e-14 82.8 123 48.0
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 1.8e-13 80.1 139 43.2
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.1e-12 77.4 111 48.6
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 1.5e-12 77.0 115 50.4
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 1.1e-10 70.9 98 49.0
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 4.5e-09 65.5 65 53.8
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 4.9e-08 62.0 30 83.3
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 7.1e-07 58.2 36 75.0


User provided reference genes

Program Settings